| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl24743 | DUF4923 | WP_004533112.1 | type VI secretion system tip protein VgrG | DP58_RS20325 | 1007 | GCF_000756125.1 | chromosome | NZ_CP008782.1 | 629476 | 632499 | - |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_004536495.1 | tRNA nuclease effector CdiA-2 | DP58_RS29815 | 3141 | GCF_000756125.1 | chromosome | NZ_CP008782.1 | 2996110 | 3005535 | + |
| cl16861 | LHH | WP_052409990.1 | hypothetical protein | PDUR_RS03710 | 950 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 809869 | 812721 | - |
| cl16881 | EndoU | WP_052410042.1 | hypothetical protein | PDUR_RS04575 | 936 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 1000098 | 1002908 | - |
| cl16870 | Toxin-deaminase | WP_156130381.1 | hypothetical protein | PDUR_RS28695 | 1013 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 1917557 | 1920598 | + |
| cl16862 | AHH | WP_042207580.1 | RHS repeat-associated core domain-containing protein | PDUR_RS29530 | 184 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 4229078 | 4229632 | - |
| cl00083 | HNHc (WHH) | WP_052410329.1 | phage baseplate assembly protein V | PDUR_RS20840 | 871 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 4795657 | 4798272 | - |
| cl00222 | Lyz-like | WP_081949649.1 | hypothetical protein | PDUR_RS27560 | 386 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 5622736 | 5623896 | - |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_042208629.1 | toxin C-terminal domain-containing protein | PDUR_RS24915 | 643 | GCF_000756615.1 | chromosome | NZ_CP009288.1 | 5637951 | 5639882 | - |
| cl21334 | Ntox25 | WP_052752463.1 | polymorphic toxin type 25 domain-containing protein | HA49_RS09250 | 2778 | GCF_000757425.2 | unplaced scaffold | NZ_JPKR02000003.1 | 1377397 | 1385733 | - |