| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_039324504.1 | HNH endonuclease | KP22_RS12120 | 321 | GCF_000749845.1 | unplaced scaffold | NZ_JQHM01000004.1 | 3999 | 4964 | + |
| cl21346 | Ntox50 | WP_033020545.1 | minor capsid protein | EP10_RS07480 | 485 | GCF_000750005.1 | unplaced scaffold | NZ_JPYA01000114.1 | 3872 | 5329 | + |
| cl16861 | LHH | WP_033021440.1 | pre-toxin TG domain-containing protein | EP10_RS05345 | 415 | GCF_000750005.1 | unplaced scaffold | NZ_JPYA01000135.1 | 105 | 1352 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_033022767.1 | pre-toxin TG domain-containing protein | EP10_RS02405 | 389 | GCF_000750005.1 | unplaced scaffold | NZ_JPYA01000174.1 | 20908 | 22077 | - |
| cl00222 | Lyz-like | WP_051986829.1 | glycoside hydrolase family protein | IDAT_RS13075 | 215 | GCF_000753735.1 | unplaced scaffold | NZ_JPIN01000035.1 | 651 | 1300 | - |
| cl16544 | TNT | WP_080725787.1 | hemagglutinin repeat-containing protein | DJ58_RS03355 | 2631 | GCF_000754805.1 | unplaced scaffold | NZ_KN150731.1 | 4198471 | 4206366 | - |
| cl19110 | CDI_toxin_EC869_like | WP_036938374.1 | DUF637 domain-containing protein | DR95_RS16280 | 1783 | GCF_000754995.1 | unplaced scaffold | NZ_KN150745.1 | 3559099 | 3564450 | - |
| cl00083 | HNHc (WHH) | WP_233496986.1 | RHS domain-containing protein | DR95_RS16905 | 443 | GCF_000754995.1 | unplaced scaffold | NZ_KN150746.1 | 866 | 2197 | + |
| cl16870 | Toxin-deaminase | WP_025988080.1 | hemagglutinin repeat-containing protein | DP58_RS02760 | 3131 | GCF_000756125.1 | chromosome | NZ_CP008781.1 | 630870 | 640265 | - |
| cl02411 | RES | WP_076804508.1 | hemagglutinin repeat-containing protein | DP58_RS08640 | 3123 | GCF_000756125.1 | chromosome | NZ_CP008781.1 | 1942805 | 1952176 | + |