| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl41764 | CdiA-CT_Ec_Kp-like | WP_034563892.1 | pre-toxin TG domain-containing protein | BR43_RS16370 | 301 | GCF_000744375.1 | unplaced scaffold | NZ_JQLU01000005.1 | 2493195 | 2494100 | + |
| cl00173 | VIP2 | WP_245617888.1 | minor capsid protein | BR43_RS18660 | 408 | GCF_000744375.1 | unplaced scaffold | NZ_JQLU01000005.1 | 3001366 | 3002592 | + |
| cl41214 | CdiA-CT_Ec-like | WP_034088801.1 | hypothetical protein | BS75_RS16670 | 668 | GCF_000744705.1 | unplaced scaffold | NZ_JQML01000001.1 | 3870902 | 3872908 | - |
| cl21440 | Tox-REase-5 | WP_235215291.1 | Tox-REase-5 domain-containing protein | BS73_RS39055 | 408 | GCF_000744815.1 | unplaced scaffold | NZ_JQMQ01000004.1 | 141498 | 142724 | + |
| cl00296 | Peptidase_C39_like | WP_051953848.1 | cysteine peptidase family C39 domain-containing protein | Q392_RS22025 | 1766 | GCF_000745855.1 | unplaced scaffold | NZ_JQKD01000052.1 | 24362 | 29662 | + |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_051941055.1 | VENN motif pre-toxin domain-containing protein | Q384_RS12810 | 370 | GCF_000745895.1 | unplaced scaffold | NZ_KN050776.1 | 3265 | 4377 | - |
| cl00083 | HNHc (WHH) | WP_042978704.1 | T7SS effector LXG polymorphic toxin | DJ93_RS00540 | 565 | GCF_000746925.1 | unplaced scaffold | NZ_JMQC01000007.1 | 47108 | 48805 | + |
| cl16881 | EndoU | WP_042979019.1 | EndoU domain-containing protein | DJ93_RS02390 | 521 | GCF_000746925.1 | unplaced scaffold | NZ_JMQC01000008.1 | 326431 | 327996 | + |
| cl00083 | HNHc (WHH) | WP_042979339.1 | WXG100 family type VII secretion target | DJ93_RS04290 | 407 | GCF_000746925.1 | unplaced scaffold | NZ_JMQC01000008.1 | 706050 | 707273 | + |
| cl00083 | HNHc (WHH) | WP_042983729.1 | WXG100 family type VII secretion target | DJ93_RS24755 | 407 | GCF_000746925.1 | unplaced scaffold | NZ_JMQC01000008.1 | 4661020 | 4662243 | - |