| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_044615394.1 | DUF6531 domain-containing protein | YC6258_RS00970 | 1778 | GCF_000940805.1 | chromosome | NZ_CP007142.1 | 197027 | 202363 | - |
| cl00083 | HNHc (WHH) | WP_044617927.1 | HNH endonuclease | YC6258_RS16440 | 1569 | GCF_000940805.1 | chromosome | NZ_CP007142.1 | 3956265 | 3960974 | - |
| cl16870 | Toxin-deaminase | WP_044618278.1 | hypothetical protein | YC6258_RS18730 | 726 | GCF_000940805.1 | chromosome | NZ_CP007142.1 | 4494211 | 4496391 | - |
| cl41764 | CdiA-CT_Ec_Kp-like | WP_082070909.1 | RHS repeat-associated core domain-containing protein | YC6258_RS29340 | 279 | GCF_000940805.1 | chromosome | NZ_CP007142.1 | 6327184 | 6328023 | - |
| cl21449 | Tox-HNH-EHHH | WP_082060465.1 | hypothetical protein | H744_RS03420 | 2365 | GCF_000940995.1 | chromosome | NZ_CP005973.1 | 816857 | 823954 | + |
| cl00222 | Lyz-like | WP_044853520.1 | transglycosylase SLT domain-containing protein | SD37_RS01525 | 372 | GCF_000943515.2 | chromosome | NZ_CP016174.1 | 321427 | 322545 | + |
| cl16881 | EndoU | WP_145926791.1 | polymorphic toxin-type HINT domain-containing protein | SD37_RS33350 | 979 | GCF_000943515.2 | chromosome | NZ_CP016174.1 | 7669222 | 7672161 | - |
| cl00083 | HNHc (WHH) | WP_044830550.1 | HNH endonuclease | SG35_RS01390 | 661 | GCF_000948975.1 | unplaced scaffold | NZ_JYNI01000001.1 | 342866 | 344851 | - |
| cl00083 | HNHc (WHH) | WP_044839278.1 | HNH endonuclease | SG34_RS14480 | 541 | GCF_000948985.1 | unplaced scaffold | NZ_JYNJ01000065.1 | 7259 | 8884 | + |
| cl21341 | Ntox43 | WP_044839484.1 | polymorphic toxin type 43 domain-containing protein | SG34_RS15615 | 2510 | GCF_000948985.1 | unplaced scaffold | NZ_JYNJ01000068.1 | 76062 | 83594 | + |