| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21406 | CdiA-CT_Ec_tRNase | WP_198027351.1 | polymorphic toxin type 28 domain-containing protein | IG80_RS0109795 | 536 | GCF_000757605.1 | unplaced scaffold | NZ_JQAK01000004.1 | 274073 | 275683 | - |
| cl16862 | AHH | WP_052429680.1 | S8 family serine peptidase | PBOR_RS35770 | 1842 | GCF_000758665.1 | chromosome | NZ_CP009285.1 | 6755648 | 6761176 | - |
| cl00222 | Lyz-like | WP_038569320.1 | glycoside hydrolase family protein | PODO_RS06755 | 1854 | GCF_000758725.1 | chromosome | NZ_CP009428.1 | 1578452 | 1584016 | + |
| cl21425 | Tox-ART-HYD1 | WP_169744745.1 | RHS repeat protein | PODO_RS06840 | 1843 | GCF_000758725.1 | chromosome | NZ_CP009428.1 | 1603766 | 1609297 | + |
| cl16544 | TNT | WP_014091631.1 | glycohydrolase toxin TNT-related protein | JL52_RS14510 | 616 | GCF_000763515.1 | chromosome | NZ_CP009577.1 | 125814 | 127664 | + |
| cl16544 | TNT | WP_231845367.1 | glycohydrolase toxin TNT-related protein | JL52_RS14675 | 576 | GCF_000763515.1 | chromosome | NZ_CP009577.1 | 1706829 | 1708559 | - |
| cl41756 | PoNe | WP_033138471.1 | hypothetical protein | LD28_RS0118920 | 439 | GCF_000764645.1 | unplaced scaffold | NZ_JRGK01000301.1 | 22482 | 23801 | - |
| cl16870 | Toxin-deaminase | WP_244875199.1 | hemagglutinin repeat-containing protein | NC00_RS19810 | 1855 | GCF_000764855.1 | unplaced scaffold | NZ_KN265544.1 | 66 | 5633 | - |
| cl16861 | LHH | WP_052167461.1 | hypothetical protein | EP57_RS17100 | 559 | GCF_000766865.1 | unplaced scaffold | NZ_JNFA01000002.1 | 61114 | 62793 | + |
| cl16881 | EndoU | WP_052167465.1 | T7SS effector LXG polymorphic toxin | EP57_RS01165 | 520 | GCF_000766865.1 | unplaced scaffold | NZ_JNFA01000002.1 | 102695 | 104257 | + |