| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16881 | EndoU | WP_034323298.1 | T7SS effector LXG polymorphic toxin | BA70_RS13760 | 454 | GCF_000715205.1 | unplaced scaffold | NZ_JOTP01000018.1 | 99 | 1463 | + |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_050502016.1 | polymorphic toxin-type HINT domain-containing protein | HY87_RS0103310 | 2319 | GCF_000715845.1 | unplaced scaffold | NZ_JNYL01000289.1 | 4049 | 11008 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_234323118.1 | ricin-type beta-trefoil lectin domain protein | OO47_RS10150 | 1642 | GCF_000716625.1 | unplaced scaffold | NZ_JNXJ01000010.1 | 44433 | 49361 | - |
| cl00083 | HNHc (WHH) | WP_033362848.1 | polymorphic toxin-type HINT domain-containing protein | OP18_RS32105 | 2290 | GCF_000716715.1 | unplaced scaffold | NZ_JNYJ01000033.1 | 80042 | 86914 | + |
| cl00222 | Lyz-like | WP_240490751.1 | transglycosylase SLT domain-containing protein | OO60_RS34510 | 360 | GCF_000716785.1 | unplaced scaffold | NZ_JNYY01000018.1 | 53568 | 54650 | - |
| cl41756 | PoNe | WP_033263278.1 | DUF6531 domain-containing protein | OO60_RS39090 | 1381 | GCF_000716785.1 | unplaced scaffold | NZ_JNYY01000025.1 | 172088 | 176234 | - |
| cl16862 | AHH | WP_051744531.1 | DUF6531 domain-containing protein | OP79_RS09180 | 1512 | GCF_000716805.1 | unplaced scaffold | NZ_JNWJ01000007.1 | 147315 | 151853 | + |
| cl21449 | Tox-HNH-EHHH | WP_033321722.1 | HNH/endonuclease VII fold putative polymorphic toxin | OP79_RS20430 | 1592 | GCF_000716805.1 | unplaced scaffold | NZ_JNWJ01000018.1 | 75811 | 80589 | + |
| cl21328 | Ntox17 | WP_051710230.1 | polymorphic toxin type 17 domain-containing protein | OO67_RS40320 | 1171 | GCF_000717025.1 | unplaced scaffold | NZ_JNXG01000029.1 | 12828 | 16343 | + |
| cl41215 | CdiA-CT_5T87E_Ct | WP_078625319.1 | DUF6531 domain-containing protein | OO68_RS15655 | 1527 | GCF_000717055.1 | unplaced scaffold | NZ_JNXI01000009.1 | 36846 | 41429 | - |