| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl38048 | Peptidase_M23 | WP_024997626.1 | peptidoglycan DD-metalloendopeptidase family protein | C511_RS18305 | 305 | GCF_000428125.1 | unplaced scaffold | NZ_ATZI01000008.1 | 4205 | 5122 | + |
| cl38048 | Peptidase_M23 | WP_154657489.1 | peptidoglycan DD-metalloendopeptidase family protein | C511_RS16465 | 737 | GCF_000428125.1 | unplaced scaffold | NZ_ATZI01000008.1 | 16977 | 19190 | + |
| cl41756 | PoNe | WP_028455420.1 | RHS repeat-associated core domain-containing protein | C515_RS0110000 | 398 | GCF_000428145.1 | unplaced scaffold | NZ_ATZJ01000022.1 | 3263 | 4459 | - |
| cl16862 | AHH | WP_081687018.1 | RHS repeat-associated core domain-containing protein | C515_RS23255 | 167 | GCF_000428145.1 | unplaced scaffold | NZ_ATZJ01000088.1 | 804 | 1307 | - |
| cl16862 | AHH | WP_211234092.1 | AHH domain-containing protein | C515_RS24125 | 150 | GCF_000428145.1 | unplaced scaffold | NZ_ATZJ01000089.1 | 1 | 454 | + |
| cl16862 | AHH | WP_211236802.1 | AHH domain-containing protein | F559_RS28400 | 390 | GCF_000428465.1 | unplaced scaffold | NZ_ATZZ01000010.1 | 589001 | 590173 | - |
| cl16881 | EndoU | WP_084300605.1 | EndoU domain-containing protein | F559_RS0122850 | 2189 | GCF_000428465.1 | unplaced scaffold | NZ_KE386751.1 | 47564 | 54133 | - |
| cl00083 | HNHc (WHH) | WP_051303292.1 | HNH endonuclease | G337_RS26370 | 995 | GCF_000428725.1 | unplaced scaffold | NZ_AUAM01000044.1 | 31482 | 34469 | - |
| cl26675 | COG5529 | WP_169719113.1 | hypothetical protein | G391_RS15485 | 306 | GCF_000428765.1 | unplaced scaffold | NZ_KE386797.1 | 83405 | 84325 | - |
| cl00296 | Peptidase_C39_like | WP_161629778.1 | cysteine peptidase family C39 domain-containing protein | G493_RS0101995 | 1316 | GCF_000429945.1 | unplaced scaffold | NZ_AUCV01000002.1 | 1277 | 5227 | - |