| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16625 | Tae4 | WP_200505789.1 | T6SS effector amidase Tae4 family protein | I5M27_RS08620 | 1912 | GCF_016623615.1 | unplaced scaffold | NZ_JAEHFX010000003.1 | 460798 | 466536 | + |
| cl00083 | HNHc (WHH) | WP_200689692.1 | HNH endonuclease | JJJ17_RS20135 | 315 | GCF_016629665.1 | unplaced scaffold | NZ_JAEPRQ010000018.1 | 4380 | 5327 | + |
| cl01480 | DUF2235 | WP_200591674.1 | DUF2235 domain-containing protein | JJB74_RS09840 | 4635 | GCF_016632335.1 | unplaced scaffold | NZ_JAEPBG010000003.1 | 293240 | 307147 | + |
| cl00222 | Lyz-like | WP_200596889.1 | LysM peptidoglycan-binding domain-containing protein | JJB74_RS25665 | 4178 | GCF_016632335.1 | unplaced scaffold | NZ_JAEPBG010000016.1 | 78434 | 90970 | + |
| cl00083 | HNHc (WHH) | WP_238714695.1 | hypothetical protein | JJB97_RS14390 | 166 | GCF_016632365.1 | unplaced scaffold | NZ_JAEPBH010000041.1 | 90 | 590 | + |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_238715349.1 | S-type pyocin domain-containing protein | JJB97_RS17420 | 520 | GCF_016632365.1 | unplaced scaffold | NZ_JAEPBH010000083.1 | 1164 | 2726 | + |
| cl16861 | LHH | WP_238715437.1 | hypothetical protein | JJB97_RS17945 | 276 | GCF_016632365.1 | unplaced scaffold | NZ_JAEPBH010000120.1 | 1 | 831 | + |
| cl21427 | Tox-GHH2 | WP_228397086.1 | DUF4150 domain-containing protein | I2492_RS02010 | 538 | GCF_016649355.1 | unplaced scaffold | NZ_JADRCP010000001.1 | 483789 | 485405 | + |
| cl41764 | CdiA-CT_Ec_Kp-like | WP_228398304.1 | hemagglutinin repeat-containing protein | I2492_RS10850 | 1067 | GCF_016649355.1 | unplaced scaffold | NZ_JADRCP010000002.1 | 352204 | 355407 | + |
| cl21427 | Tox-GHH2 | WP_201211691.1 | DUF4150 domain-containing protein | CCR84_RS09580 | 362 | GCF_016653115.1 | unplaced scaffold | NZ_NHRX01000047.1 | 6030 | 7118 | - |