| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21449 | Tox-HNH-EHHH | WP_245684501.1 | DUF6531 domain-containing protein | IF61_RS0113265 | 1422 | GCF_000719265.1 | unplaced scaffold | NZ_JOFL01000009.1 | 213831 | 218099 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_234439735.1 | ricin-type beta-trefoil lectin domain protein | IF78_RS0127880 | 1633 | GCF_000719285.1 | unplaced scaffold | NZ_JOFS01000023.1 | 8344 | 13245 | + |
| cl00222 | Lyz-like | WP_030913742.1 | transglycosylase SLT domain-containing protein | IG98_RS0119355 | 363 | GCF_000721075.1 | unplaced scaffold | NZ_JOEQ01000012.1 | 193800 | 194891 | + |
| cl21346 | Ntox50 | WP_036681525.1 | polymorphic toxin type 50 domain-containing protein | ET33_RS12830 | 1806 | GCF_000722545.1 | unplaced scaffold | NZ_JNVM01000010.1 | 127465 | 132885 | + |
| cl16881 | EndoU | WP_036689236.1 | EndoU domain-containing protein | ET33_RS26350 | 863 | GCF_000722545.1 | unplaced scaffold | NZ_JNVM01000024.1 | 53866 | 56457 | + |
| cl00083 | HNHc (WHH) | WP_144241643.1 | HNH endonuclease | GJA_RS25620 | 264 | GCF_000723165.1 | chromosome | NZ_HG322949.1 | 5904672 | 5905466 | + |
| cl21444 | Tox-SHH | WP_051706382.1 | Hint domain-containing protein | RBI_RS13955 | 308 | GCF_000723465.1 | chromosome | NZ_HF545616.1 | 692689 | 693615 | + |
| cl16881 | EndoU | WP_081855960.1 | EndoU domain-containing protein | RBI_RS14540 | 227 | GCF_000723465.1 | chromosome | NZ_HF545616.1 | 1052118 | 1052801 | + |
| cl16861 | LHH | WP_081856094.1 | T7SS effector LXG polymorphic toxin | BN990_RS22185 | 699 | GCF_000723585.1 | unplaced scaffold | NZ_CCDP010000001.1 | 244640 | 246739 | + |
| cl00173 | VIP2 | WP_051739195.1 | hypothetical protein | BN990_RS23200 | 601 | GCF_000723585.1 | unplaced scaffold | NZ_CCDP010000002.1 | 10810 | 12615 | - |