| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21406 | CdiA-CT_Ec_tRNase | WP_234848649.1 | polymorphic toxin type 28 domain-containing protein | L0M19_RS23350 | 1462 | GCF_021474405.1 | unplaced scaffold | NZ_JAKEIO010000080.1 | 7591 | 11979 | + |
| cl41215 | CdiA-CT_5T87E_Ct | WP_234766991.1 | sugar-binding protein | L0P92_RS34480 | 2285 | GCF_021474425.1 | unplaced scaffold | NZ_JAKEIP010000227.1 | 2820 | 9677 | - |
| cl26675 | COG5529 | WP_234751879.1 | hypothetical protein | L0B84_RS12755 | 1309 | GCF_021483115.1 | unplaced scaffold | NZ_JAKEED010000008.1 | 9373 | 13302 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_235288756.1 | pre-toxin TG domain-containing protein | L1N82_RS17550 | 570 | GCF_021532315.1 | unplaced scaffold | NZ_JAKGAO010000015.1 | 145235 | 146947 | - |
| cl16881 | EndoU | WP_235288764.1 | EndoU domain-containing protein | L1N82_RS17590 | 615 | GCF_021532315.1 | unplaced scaffold | NZ_JAKGAO010000015.1 | 150713 | 152560 | - |
| cl21494 | Abhydrolase | WP_235239523.1 | DUF6531 domain-containing protein | L1N85_RS14050 | 1977 | GCF_021532375.1 | unplaced scaffold | NZ_JAKGAP010000030.1 | 1854 | 7787 | - |
| cl30079 | OmpA_C-like | WP_235291116.1 | DUF4157 domain-containing protein | L2586_RS02135 | 712 | GCF_021533215.1 | unplaced scaffold | NZ_JAJNKA010000001.1 | 591025 | 593163 | - |
| cl21494 | Abhydrolase | WP_235291123.1 | DUF4157 domain-containing protein | L2586_RS02170 | 1750 | GCF_021533215.1 | unplaced scaffold | NZ_JAJNKA010000001.1 | 599573 | 604825 | - |
| cl16862 | AHH | WP_235291125.1 | DUF4157 domain-containing protein | L2586_RS02180 | 2960 | GCF_021533215.1 | unplaced scaffold | NZ_JAJNKA010000001.1 | 605926 | 614808 | - |
| cl21405 | Ntox15 | WP_192439836.1 | polymorphic toxin type 15 domain-containing protein | L1P09_RS08795 | 443 | GCF_021560075.1 | chromosome | NZ_CP091088.1 | 1887400 | 1888731 | - |