| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_236117463.1 | HNH endonuclease | L1O03_RS00420 | 1204 | GCF_021568315.1 | unplaced scaffold | NZ_JAKGSI010000001.1 | 90635 | 94249 | + |
| cl16544 | TNT | WP_232880829.1 | glycohydrolase toxin TNT-related protein | L6D77_RS03290 | 497 | GCF_021601385.1 | unplaced scaffold | NZ_BQHO01000003.1 | 66906 | 68399 | - |
| cl41215 | CdiA-CT_5T87E_Ct | WP_102718248.1 | S-type pyocin domain-containing protein | L6D82_RS10595 | 413 | GCF_021601625.1 | unplaced scaffold | NZ_BQHR01000006.1 | 48677 | 49918 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_236189434.1 | hemagglutinin repeat-containing protein | L6D82_RS13025 | 4387 | GCF_021601625.1 | unplaced scaffold | NZ_BQHR01000007.1 | 249630 | 262793 | - |
| cl01480 | DUF2235 | WP_236190445.1 | type VI secretion system tip protein VgrG | L6D82_RS16140 | 1113 | GCF_021601625.1 | unplaced scaffold | NZ_BQHR01000010.1 | 24452 | 27793 | + |
| cl21449 | Tox-HNH-EHHH | WP_248285767.1 | HNH/endonuclease VII fold putative polymorphic toxin | L6D82_RS26155 | 166 | GCF_021601625.1 | unplaced scaffold | NZ_BQHR01000023.1 | 78456 | 78957 | - |
| cl21344 | Ntox47 | WP_131671249.1 | polymorphic toxin type 47 domain-containing protein | L6D63_RS08390 | 1556 | GCF_021602155.1 | unplaced scaffold | NZ_BQHY01000004.1 | 338672 | 343342 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_131670028.1 | DUF6531 domain-containing protein | L6D63_RS20795 | 1547 | GCF_021602155.1 | unplaced scaffold | NZ_BQHY01000013.1 | 166585 | 171228 | - |
| cl01480 | DUF2235 | WP_236187595.1 | type VI secretion system tip protein VgrG | L6D74_RS02500 | 1118 | GCF_021602345.1 | unplaced scaffold | NZ_BQID01000001.1 | 536341 | 539697 | + |
| cl00083 | HNHc (WHH) | WP_236189410.1 | S-type pyocin domain-containing protein | L6D74_RS12905 | 700 | GCF_021602345.1 | unplaced scaffold | NZ_BQID01000005.1 | 191260 | 193362 | + |