| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_205379007.1 | RHS repeat-associated core domain-containing protein | JE024_RS40630 | 2193 | GCF_016919245.1 | unlocalized scaffold on plasmid | NZ_JAFEJA010000004.1 | 35258 | 41839 | - |
| cl21441 | Tox-REase-7 | WP_205445170.1 | hemagglutinin repeat-containing protein | IDJ81_RS07120 | 3244 | GCF_016925655.1 | chromosome | NZ_CP061510.1 | 1519944 | 1529678 | + |
| cl16862 | AHH | WP_176220762.1 | S8 family serine peptidase | JW799_RS03325 | 1846 | GCF_016937515.1 | unplaced scaffold | NZ_JAFHKM010000002.1 | 704145 | 709685 | - |
| cl21449 | Tox-HNH-EHHH | WP_205519806.1 | RHS domain-containing protein | JWR99_RS02240 | 543 | GCF_016937555.1 | unplaced scaffold | NZ_JAFHKJ010000011.1 | 1 | 1632 | + |
| cl16862 | AHH | WP_225908765.1 | AHH domain-containing protein | JWR99_RS11020 | 129 | GCF_016937555.1 | unplaced scaffold | NZ_JAFHKJ010000044.1 | 11807 | 12196 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_205519947.1 | RHS repeat-associated core domain-containing protein | JWR99_RS11590 | 590 | GCF_016937555.1 | unplaced scaffold | NZ_JAFHKJ010000046.1 | 73641 | 75414 | - |
| cl21405 | Ntox15 | WP_205489132.1 | hemagglutinin repeat-containing protein | JWR99_RS15965 | 3102 | GCF_016937555.1 | unplaced scaffold | NZ_JAFHKJ010000065.1 | 14901 | 24209 | - |
| cl00296 | Peptidase_C39_like | WP_205466132.1 | hemagglutinin repeat-containing protein | JW897_RS11265 | 3176 | GCF_016937655.1 | unplaced scaffold | NZ_JAFHKL010000005.1 | 272826 | 282356 | + |
| cl16862 | AHH | WP_082805444.1 | pre-toxin TG domain-containing protein | JTI59_RS04555 | 371 | GCF_016939435.1 | chromosome | NZ_CP070511.1 | 921133 | 922248 | + |
| cl41214 | CdiA-CT_Ec-like | WP_240345865.1 | pre-toxin TG domain-containing protein | JTI59_RS04685 | 363 | GCF_016939435.1 | chromosome | NZ_CP070511.1 | 947657 | 948748 | + |