| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21346 | Ntox50 | WP_204776532.1 | polymorphic toxin type 50 domain-containing protein | H5993_RS05285 | 507 | GCF_016900115.1 | unplaced scaffold | NZ_JACJJQ010000020.1 | 18526 | 20049 | + |
| cl21334 | Ntox25 | WP_054410859.1 | polymorphic toxin type 25 domain-containing protein | JRC41_RS13045 | 155 | GCF_016904755.1 | chromosome | NZ_CP070290.1 | 2719126 | 2719593 | - |
| cl00296 | Peptidase_C39_like | WP_204631093.1 | hypothetical protein | ISS99_RS08025 | 1909 | GCF_016904945.1 | unplaced scaffold | NZ_JADIKF010000038.1 | 88136 | 93865 | - |
| cl01480 | DUF2235 | WP_204637776.1 | PAAR domain-containing protein | ISP20_RS19370 | 677 | GCF_016905005.1 | unplaced scaffold | NZ_JADIKC010000010.1 | 157718 | 159751 | + |
| cl16881 | EndoU | WP_204607972.1 | DUF6531 domain-containing protein | JOD51_RS09160 | 1798 | GCF_016907335.1 | unplaced scaffold | NZ_JAFBBT010000001.1 | 1904545 | 1909941 | + |
| cl21406 | CdiA-CT_Ec_tRNase | WP_204808522.1 | polymorphic toxin type 28 domain-containing protein | JOD48_RS08330 | 2230 | GCF_016907365.1 | unplaced scaffold | NZ_JAFBBV010000001.1 | 1854780 | 1861472 | + |
| cl21494 | Abhydrolase | WP_204534328.1 | hypothetical protein | JOD47_RS11210 | 490 | GCF_016907495.1 | unplaced scaffold | NZ_JAFBCC010000001.1 | 2332242 | 2333714 | - |
| cl21449 | Tox-HNH-EHHH | WP_239562203.1 | HNH/endonuclease VII fold putative polymorphic toxin | JOE68_RS31080 | 340 | GCF_016907655.1 | unplaced scaffold | NZ_JAFBCL010000001.1 | 2336186 | 2337208 | - |
| cl00222 | Lyz-like | WP_239573870.1 | transglycosylase SLT domain-containing protein | JOD54_RS05175 | 335 | GCF_016907695.1 | unplaced scaffold | NZ_JAFBCK010000001.1 | 1141770 | 1142777 | - |
| cl41214 | CdiA-CT_Ec-like | WP_239574827.1 | hypothetical protein | JOD54_RS19510 | 2297 | GCF_016907695.1 | unplaced scaffold | NZ_JAFBCK010000001.1 | 4214352 | 4221245 | + |