| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_193581106.1 | DUF4157 domain-containing protein | J2Z65_RS23360 | 455 | GCF_017874035.1 | unplaced scaffold | NZ_JAGGKV010000015.1 | 269 | 1636 | - |
| cl16881 | EndoU | WP_167057121.1 | pre-toxin TG domain-containing protein | J2Z65_RS31275 | 366 | GCF_017874035.1 | unplaced scaffold | NZ_JAGGKV010000029.1 | 64196 | 65296 | - |
| cl00173 | VIP2 | WP_185118005.1 | minor capsid protein | J2Z47_RS18825 | 535 | GCF_017874075.1 | unplaced scaffold | NZ_JAGGKW010000009.1 | 202249 | 203856 | + |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_209858252.1 | toxin C-terminal domain-containing protein | J2Z69_RS00595 | 2067 | GCF_017874255.1 | unplaced scaffold | NZ_JAGGLD010000001.1 | 144678 | 150881 | + |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_209861234.1 | S8 family serine peptidase | J2Z69_RS08835 | 2915 | GCF_017874255.1 | unplaced scaffold | NZ_JAGGLD010000002.1 | 398653 | 407400 | - |
| cl00296 | Peptidase_C39_like | WP_209862553.1 | cysteine peptidase family C39 domain-containing protein | J2Z69_RS11790 | 1084 | GCF_017874255.1 | unplaced scaffold | NZ_JAGGLD010000003.1 | 501744 | 504998 | - |
| cl26675 | COG5529 | WP_209678711.1 | DUF2341 domain-containing protein | J2755_RS01610 | 2871 | GCF_017874375.1 | unplaced scaffold | NZ_JAGGLK010000001.1 | 290875 | 299490 | - |
| cl00222 | Lyz-like | WP_209663657.1 | transglycosylase SLT domain-containing protein | JOM49_RS07735 | 371 | GCF_017875555.1 | unplaced scaffold | NZ_JAGGMS010000001.1 | 1623767 | 1624882 | - |
| cl21444 | Tox-SHH | WP_209666068.1 | DUF6531 domain-containing protein | JOM49_RS21580 | 1465 | GCF_017875555.1 | unplaced scaffold | NZ_JAGGMS010000001.1 | 4818767 | 4823164 | - |
| cl16862 | AHH | WP_245370944.1 | AHH domain-containing protein | JOM49_RS26470 | 2099 | GCF_017875555.1 | unplaced scaffold | NZ_JAGGMS010000001.1 | 5943952 | 5950251 | + |