| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_189554437.1 | pre-toxin TG domain-containing protein | IE109_RS29590 | 684 | GCF_014649735.1 | unplaced scaffold | NZ_BMTP01000021.1 | 54132 | 56186 | + |
| cl16881 | EndoU | WP_190090936.1 | EndoU domain-containing protein | IE252_RS20695 | 1722 | GCF_014649795.1 | unplaced scaffold | NZ_BMTS01000009.1 | 121226 | 126395 | + |
| cl21328 | Ntox17 | WP_229848874.1 | polymorphic toxin type 17 domain-containing protein | IE252_RS30260 | 1423 | GCF_014649795.1 | unplaced scaffold | NZ_BMTS01000016.1 | 101180 | 105451 | + |
| cl41214 | CdiA-CT_Ec-like | WP_190092856.1 | hypothetical protein | IE252_RS31580 | 1425 | GCF_014649795.1 | unplaced scaffold | NZ_BMTS01000018.1 | 48383 | 52660 | - |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_229885200.1 | toxin C-terminal domain-containing protein | IE170_RS27090 | 2204 | GCF_014649915.1 | unplaced scaffold | NZ_BMTY01000024.1 | 137178 | 143792 | - |
| cl21449 | Tox-HNH-EHHH | WP_189812922.1 | DUF6531 domain-containing protein | IE170_RS31615 | 1568 | GCF_014649915.1 | unplaced scaffold | NZ_BMTY01000037.1 | 6778 | 11484 | - |
| cl41764 | CdiA-CT_Ec_Kp-like | WP_229885727.1 | sugar-binding protein | IE172_RS00780 | 2311 | GCF_014649995.1 | unplaced scaffold | NZ_BMUC01000001.1 | 165117 | 172052 | + |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_190098415.1 | toxin C-terminal domain-containing protein | IE172_RS19000 | 1906 | GCF_014649995.1 | unplaced scaffold | NZ_BMUC01000008.1 | 290254 | 295974 | + |
| cl21406 | CdiA-CT_Ec_tRNase | WP_189819651.1 | polymorphic toxin type 28 domain-containing protein | IE273_RS37805 | 1563 | GCF_014650115.1 | unplaced scaffold | NZ_BMUI01000035.1 | 53809 | 58500 | + |
| cl21425 | Tox-ART-HYD1 | WP_189819995.1 | hypothetical protein | IE273_RS39840 | 466 | GCF_014650115.1 | unplaced scaffold | NZ_BMUI01000044.1 | 58 | 1458 | + |