| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl01480 | DUF2235 | WP_018344293.1 | DUF2235 domain-containing protein | A3EE_RS0115180 | 692 | GCF_000379725.1 | unplaced scaffold | NZ_KB903662.1 | 144438 | 146516 | - |
| cl01480 | DUF2235 | WP_018344942.1 | DUF2235 domain-containing protein | A3EE_RS0118535 | 673 | GCF_000379725.1 | unplaced scaffold | NZ_KB903665.1 | 92317 | 94338 | + |
| cl21449 | Tox-HNH-EHHH | WP_245563635.1 | HNH/endonuclease VII fold putative polymorphic toxin | A3G1_RS37740 | 2290 | GCF_000379825.1 | unplaced scaffold | NZ_KB903838.1 | 246257 | 253129 | + |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_018378338.1 | pre-toxin TG domain-containing protein | A3I9_RS13010 | 225 | GCF_000380125.1 | unplaced scaffold | NZ_KB904579.1 | 120039 | 120716 | - |
| cl21444 | Tox-SHH | WP_157533412.1 | DUF6531 domain-containing protein | G367_RS0107670 | 1639 | GCF_000380565.1 | unplaced scaffold | NZ_AQYJ01000024.1 | 184113 | 189032 | + |
| cl00083 | HNHc (WHH) | WP_019540655.1 | HNH endonuclease | F597_RS0115400 | 2576 | GCF_000380985.1 | unplaced scaffold | NZ_KB905703.1 | 25700 | 33430 | + |
| cl41756 | PoNe | WP_022820193.1 | filamentous hemagglutinin N-terminal domain-containing protein | G326_RS09585 | 2771 | GCF_000381725.1 | unplaced scaffold | NZ_KB906927.1 | 1 | 8312 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_169514715.1 | hypothetical protein | G339_RS0107210 | 499 | GCF_000381885.1 | unplaced scaffold | NZ_KB907209.1 | 699403 | 700902 | + |
| cl21439 | Tox-REase-3 | WP_019635402.1 | hypothetical protein | G358_RS0101345 | 939 | GCF_000381905.1 | unplaced scaffold | NZ_KB907245.1 | 296491 | 299310 | - |
| cl21346 | Ntox50 | WP_019636134.1 | polymorphic toxin type 50 domain-containing protein | G358_RS29460 | 583 | GCF_000381905.1 | unplaced scaffold | NZ_KB907248.1 | 69744 | 71495 | - |