| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00064 | Peptidase_M54 | WP_051336214.1 | DUF4280 domain-containing protein | H526_RS29455 | 568 | GCF_000430645.1 | unplaced scaffold | NZ_AUMK01000021.1 | 30709 | 32415 | + |
| cl00173 | VIP2 | WP_081415679.1 | DUF4157 domain-containing protein | H526_RS32130 | 925 | GCF_000430645.1 | unplaced scaffold | NZ_KE387185.1 | 1301582 | 1304359 | + |
| cl16881 | EndoU | WP_026678537.1 | EndoU domain-containing protein | H538_RS25170 | 369 | GCF_000430745.1 | unplaced scaffold | NZ_AUMP01000046.1 | 17871 | 18980 | - |
| cl21444 | Tox-SHH | WP_081412785.1 | T7SS effector LXG polymorphic toxin | H538_RS25915 | 442 | GCF_000430745.1 | unplaced scaffold | NZ_KE387235.1 | 61550 | 62878 | - |
| cl16862 | AHH | WP_155845329.1 | AHH domain-containing protein | H559_RS21545 | 323 | GCF_000430805.1 | unplaced scaffold | NZ_AUMS01000008.1 | 39571 | 40542 | - |
| cl21346 | Ntox50 | WP_051349304.1 | DUF6443 domain-containing protein | H561_RS22025 | 1180 | GCF_000430845.1 | unplaced scaffold | NZ_AUMU01000002.1 | 438820 | 442362 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_051349334.1 | DUF6443 domain-containing protein | H561_RS22235 | 1286 | GCF_000430845.1 | unplaced scaffold | NZ_AUMU01000006.1 | 207475 | 211335 | + |
| cl01480 | DUF2235 | WP_020843629.1 | type VI secretion system tube protein Hcp | A464_RS03250 | 664 | GCF_000439255.1 | chromosome | NC_021870.1 | 679593 | 681587 | + |
| cl00083 | HNHc (WHH) | WP_020844625.1 | Rhs-family protein | A464_RS25865 | 369 | GCF_000439255.1 | chromosome | NC_021870.1 | 2143683 | 2144792 | - |
| cl01480 | DUF2235 | WP_029684260.1 | DUF2235 domain-containing protein | DW47_RS0100030 | 625 | GCF_000439375.1 | unplaced scaffold | NZ_ATMI01000001.1 | 3039 | 4916 | - |