| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21449 | Tox-HNH-EHHH | WP_168087286.1 | polymorphic toxin-type HINT domain-containing protein | HCN52_RS05785 | 2286 | GCF_012033785.1 | unplaced scaffold | NZ_JAAVJC010000026.1 | 12522 | 19382 | - |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_209308306.1 | hypothetical protein | HBH26_RS20370 | 280 | GCF_012035195.1 | unplaced scaffold | NZ_JAAVJH010000002.1 | 247717 | 248559 | + |
| cl00083 | HNHc (WHH) | WP_238483787.1 | HNH endonuclease | HBB17_RS17265 | 335 | GCF_012070565.1 | unplaced scaffold | NZ_JAAQRO010000042.1 | 32036 | 33043 | - |
| cl21427 | Tox-GHH2 | WP_168040823.1 | DUF4150 domain-containing protein | GWK15_RS08310 | 378 | GCF_012163135.1 | unplaced scaffold | NZ_JAAVUP010000002.1 | 373654 | 374790 | - |
| cl21425 | Tox-ART-HYD1 | WP_167974996.1 | polymorphic toxin-type HINT domain-containing protein | FXN61_RS16830 | 2226 | GCF_012184385.1 | unplaced scaffold | NZ_VSRL01000052.1 | 6620 | 13300 | - |
| cl30079 | OmpA_C-like | WP_168058609.1 | DUF4157 domain-containing protein | MNODULE_RS06370 | 512 | GCF_012184425.1 | unplaced scaffold | NZ_VTOW01000001.1 | 1277364 | 1278902 | + |
| cl00064 | Peptidase_M54 | WP_238339666.1 | DUF4157 domain-containing protein | MNODULE_RS19590 | 295 | GCF_012184425.1 | unplaced scaffold | NZ_VTOW01000004.1 | 264045 | 264932 | + |
| cl16881 | EndoU | WP_167872120.1 | T7SS effector LXG polymorphic toxin | G4P54_RS06310 | 623 | GCF_012225885.1 | chromosome | NZ_CP048852.1 | 1191100 | 1192971 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_167872623.1 | ribonuclease YeeF family protein | G4P54_RS10535 | 619 | GCF_012225885.1 | chromosome | NZ_CP048852.1 | 2012801 | 2014660 | + |
| cl16862 | AHH | WP_167873498.1 | T7SS effector LXG polymorphic toxin | G4P54_RS18655 | 658 | GCF_012225885.1 | chromosome | NZ_CP048852.1 | 3548210 | 3550186 | - |