| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00064 | Peptidase_M54 | WP_172658627.1 | type VI secretion system tip protein VgrG | AFAEC_RS05160 | 1115 | GCF_013201705.1 | chromosome | NZ_CP053837.1 | 1022799 | 1026146 | + |
| cl41756 | PoNe | WP_246269755.1 | DUF4157 domain-containing protein | HQN86_RS21340 | 1512 | GCF_013204795.1 | unplaced scaffold | NZ_JABMKW010000020.1 | 567471 | 572009 | + |
| cl16881 | EndoU | WP_173215516.1 | EndoU domain-containing protein | HQN90_RS00650 | 1534 | GCF_013204855.1 | unplaced scaffold | NZ_JABMKZ010000002.1 | 129146 | 133750 | - |
| cl41756 | PoNe | WP_246362239.1 | hypothetical protein | HQN90_RS11975 | 1006 | GCF_013204855.1 | unplaced scaffold | NZ_JABMKZ010000007.1 | 22595 | 25615 | - |
| cl00222 | Lyz-like | WP_173219564.1 | glycoside hydrolase family protein | HQN90_RS14285 | 1612 | GCF_013204855.1 | unplaced scaffold | NZ_JABMKZ010000009.1 | 78930 | 83768 | + |
| cl21405 | Ntox15 | WP_173240628.1 | polymorphic toxin type 15 domain-containing protein | HQR03_RS13950 | 440 | GCF_013248965.1 | unplaced scaffold | NZ_JABRVQ010000052.1 | 1090 | 2412 | + |
| cl00173 | VIP2 | WP_246277166.1 | hypothetical protein | HPT25_RS28635 | 616 | GCF_013248975.1 | unplaced scaffold | NZ_JABRWH010000001.1 | 1917665 | 1919515 | + |
| cl16544 | TNT | WP_173062977.1 | glycohydrolase toxin TNT-related protein | HPT25_RS09375 | 374 | GCF_013248975.1 | unplaced scaffold | NZ_JABRWH010000001.1 | 1921061 | 1922185 | + |
| cl21405 | Ntox15 | WP_173126326.1 | polymorphic toxin type 15 domain-containing protein | HLB44_RS20795 | 455 | GCF_013266755.1 | unplaced scaffold | NZ_JABRWJ010000006.1 | 338729 | 340096 | + |
| cl41756 | PoNe | WP_173126362.1 | hypothetical protein | HLB44_RS20855 | 505 | GCF_013266755.1 | unplaced scaffold | NZ_JABRWJ010000006.1 | 355055 | 356572 | + |