| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21441 | Tox-REase-7 | WP_185097493.1 | hypothetical protein | EG339_RS24255 | 371 | GCF_003815975.1 | chromosome | NZ_CP033932.1 | 2474779 | 2475894 | + |
| cl21405 | Ntox15 | WP_123871784.1 | polymorphic toxin type 15 domain-containing protein | EG339_RS20755 | 523 | GCF_003815975.1 | chromosome | NZ_CP033932.1 | 4540102 | 4541673 | - |
| cl21441 | Tox-REase-7 | WP_123871805.1 | cell well associated RhsD protein | EG339_RS20875 | 361 | GCF_003815975.1 | chromosome | NZ_CP033932.1 | 4570699 | 4571784 | - |
| cl21494 | Abhydrolase | WP_079467139.1 | DUF4280 domain-containing protein | EB354_RS02220 | 417 | GCF_003815995.1 | chromosome | NZ_CP033934.1 | 478011 | 479264 | + |
| cl00064 | Peptidase_M54 | WP_079467294.1 | hypothetical protein | EB354_RS23115 | 280 | GCF_003815995.1 | chromosome | NZ_CP033934.1 | 1070859 | 1071701 | + |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_170158484.1 | hypothetical protein | EDC24_RS06595 | 535 | GCF_003843875.1 | unplaced scaffold | NZ_RKRF01000008.1 | 285572 | 287179 | + |
| cl01480 | DUF2235 | WP_124233532.1 | DUF2235 domain-containing protein | EB241_RS12690 | 621 | GCF_003846135.1 | unplaced scaffold | NZ_RHHM01000009.1 | 88789 | 90654 | + |
| cl00083 | HNHc (WHH) | WP_199737414.1 | S-type pyocin domain-containing protein | EB241_RS20735 | 188 | GCF_003846135.1 | unplaced scaffold | NZ_RHHM01000038.1 | 1211 | 1777 | - |
| cl16881 | EndoU | WP_124345441.1 | hemagglutinin repeat-containing protein | C4K39_RS00835 | 4471 | GCF_003850565.1 | chromosome | NZ_CP027706.1 | 186079 | 199494 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_178083947.1 | VENN motif pre-toxin domain-containing protein | C4K39_RS31650 | 445 | GCF_003850565.1 | chromosome | NZ_CP027706.1 | 202297 | 203634 | + |