| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16870 | Toxin-deaminase | WP_161977892.1 | hypothetical protein | EL645_RS32810 | 2303 | GCF_003967555.1 | unplaced scaffold | NZ_BIFS01000002.1 | 1420885 | 1427796 | - |
| cl16544 | TNT | WP_126562480.1 | glycohydrolase toxin TNT-related protein | EKL98_RS11290 | 2275 | GCF_003970355.1 | unplaced scaffold | NZ_RYDJ01000013.1 | 12706 | 19533 | + |
| cl00222 | Lyz-like | WP_126572839.1 | type VI secretion system tip protein VgrG | EJ063_RS04705 | 995 | GCF_003970385.1 | unplaced scaffold | NZ_RXZH01000001.1 | 1103935 | 1106922 | - |
| cl21425 | Tox-ART-HYD1 | WP_126685962.1 | LysM peptidoglycan-binding domain-containing protein | EKH80_RS16895 | 6463 | GCF_003977665.1 | unplaced scaffold | NZ_RYYV01000014.1 | 47963 | 67354 | - |
| cl16870 | Toxin-deaminase | WP_230473905.1 | hemagglutinin repeat-containing protein | EKH80_RS23415 | 1114 | GCF_003977665.1 | unplaced scaffold | NZ_RYYV01000048.1 | 3220 | 6564 | - |
| cl00083 | HNHc (WHH) | WP_230473908.1 | DUF4157 domain-containing protein | EKH80_RS23470 | 702 | GCF_003977665.1 | unplaced scaffold | NZ_RYYV01000050.1 | 2096 | 4204 | + |
| cl00064 | Peptidase_M54 | WP_126777695.1 | hypothetical protein | CWE11_RS11075 | 456 | GCF_003987175.1 | unplaced scaffold | NZ_PIPM01000017.1 | 24254 | 25624 | + |
| cl16861 | LHH | WP_126834777.1 | FG-GAP-like repeat-containing protein | CWE21_RS12495 | 2624 | GCF_003987395.1 | unplaced scaffold | NZ_PIPT01000011.1 | 595 | 8469 | - |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_157981893.1 | hypothetical protein | CWE24_RS12550 | 261 | GCF_003987405.1 | unplaced scaffold | NZ_PIPU01000012.1 | 9124 | 9910 | - |
| cl00064 | Peptidase_M54 | WP_241969901.1 | hypothetical protein | CWI83_RS06700 | 447 | GCF_003987435.1 | unplaced scaffold | NZ_PIQG01000002.1 | 586711 | 588054 | - |