| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl01480 | DUF2235 | WP_123890359.1 | PAAR domain-containing protein | EF096_RS13815 | 629 | GCF_003797945.1 | unplaced scaffold | NZ_RKKU01000018.1 | 75913 | 77802 | - |
| cl21444 | Tox-SHH | WP_226906085.1 | hypothetical protein | EGX94_RS06670 | 970 | GCF_003798325.1 | chromosome | NZ_CP033719.1 | 1593195 | 1596107 | - |
| cl21405 | Ntox15 | WP_123849095.1 | DUF4157 domain-containing protein | EGT74_RS23655 | 1186 | GCF_003813775.1 | unplaced scaffold | NZ_RPDH01000003.1 | 138661 | 142221 | - |
| cl41756 | PoNe | WP_123770759.1 | hemagglutinin repeat-containing protein | EDC50_RS12215 | 3648 | GCF_003814555.1 | unplaced scaffold | NZ_RKQN01000003.1 | 384357 | 395303 | - |
| cl21406 | CdiA-CT_Ec_tRNase | WP_170176955.1 | polymorphic toxin type 28 domain-containing protein | EDD34_RS03300 | 1838 | GCF_003814695.1 | unplaced scaffold | NZ_RKQZ01000001.1 | 764003 | 769519 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_170177015.1 | polymorphic toxin-type HINT domain-containing protein | EDD34_RS08780 | 2068 | GCF_003814695.1 | unplaced scaffold | NZ_RKQZ01000001.1 | 2045627 | 2051833 | + |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_092755210.1 | minor capsid protein | EDD70_RS10985 | 198 | GCF_003814745.1 | unplaced scaffold | NZ_RKRD01000002.1 | 190701 | 191297 | + |
| cl21439 | Tox-REase-3 | WP_244260317.1 | hypothetical protein | EDD38_RS40980 | 255 | GCF_003814885.1 | unplaced scaffold | NZ_RKQG01000003.1 | 410442 | 411209 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_123821460.1 | chemotaxis protein | EDD38_RS36035 | 1249 | GCF_003814885.1 | unplaced scaffold | NZ_RKQG01000003.1 | 467270 | 471019 | + |
| cl21441 | Tox-REase-7 | WP_123876838.1 | cell well associated RhsD protein | EG346_RS02065 | 361 | GCF_003815695.1 | chromosome | NZ_CP033920.1 | 427975 | 429060 | - |