| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl19110 | CDI_toxin_EC869_like | WP_123666215.1 | Ig-like domain-containing protein | EDD29_RS21920 | 2649 | GCF_003751225.1 | unplaced scaffold | NZ_RJKE01000001.1 | 4760189 | 4768138 | - |
| cl19110 | CDI_toxin_EC869_like | WP_162870102.1 | DUF6531 domain-containing protein | EDD39_RS23780 | 1532 | GCF_003751605.1 | unplaced scaffold | NZ_RJVJ01000001.1 | 5269100 | 5273698 | - |
| cl00083 | HNHc (WHH) | WP_244945623.1 | hypothetical protein | EDD30_RS40740 | 491 | GCF_003751945.1 | unplaced scaffold | NZ_RJKL01000001.1 | 4587547 | 4589022 | + |
| cl21449 | Tox-HNH-EHHH | WP_123743893.1 | DUF6531 domain-containing protein | EDD40_RS17645 | 1490 | GCF_003752005.1 | unplaced scaffold | NZ_RJKM01000001.1 | 4196986 | 4201458 | - |
| cl41756 | PoNe | WP_167499085.1 | hypothetical protein | EDD35_RS41255 | 1107 | GCF_003752125.1 | unplaced scaffold | NZ_RKHY01000001.1 | 4707938 | 4711261 | + |
| cl21449 | Tox-HNH-EHHH | WP_123711327.1 | hemagglutinin repeat-containing protein | EDC56_RS04690 | 3354 | GCF_003752585.1 | unplaced scaffold | NZ_RKHR01000003.1 | 1038828 | 1048892 | - |
| cl00296 | Peptidase_C39_like | WP_123713739.1 | cysteine peptidase family C39 domain-containing protein | EDC56_RS16755 | 1583 | GCF_003752585.1 | unplaced scaffold | NZ_RKHR01000007.1 | 62189 | 66940 | - |
| cl21334 | Ntox25 | WP_192897706.1 | polymorphic toxin type 25 domain-containing protein | C3454_RS00005 | 223 | GCF_003795375.1 | unplaced scaffold | NZ_PQSZ01000001.1 | 1 | 673 | + |
| cl21344 | Ntox47 | WP_080754162.1 | polymorphic toxin type 47 domain-containing protein | C3454_RS12505 | 1464 | GCF_003795375.1 | unplaced scaffold | NZ_PQSZ01000003.1 | 558418 | 562812 | + |
| cl41214 | CdiA-CT_Ec-like | WP_240034406.1 | VENN motif pre-toxin domain-containing protein | C3454_RS25600 | 633 | GCF_003795375.1 | unplaced scaffold | NZ_PQSZ01000023.1 | 1 | 1902 | + |