| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_245908436.1 | hypothetical protein | CLV70_RS24885 | 403 | GCF_003002065.1 | unplaced scaffold | NZ_PVZG01000012.1 | 204821 | 206032 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_146159315.1 | polymorphic toxin-type HINT domain-containing protein | CLV72_RS02135 | 690 | GCF_003002095.1 | unplaced scaffold | NZ_PVZC01000001.1 | 565801 | 567873 | - |
| cl16544 | TNT | WP_170155814.1 | glycohydrolase toxin TNT-related protein | CLV43_RS12310 | 2195 | GCF_003002815.1 | unplaced scaffold | NZ_PVTF01000003.1 | 409035 | 415622 | + |
| cl00222 | Lyz-like | WP_106196118.1 | transglycosylase SLT domain-containing protein | CLV43_RS42955 | 405 | GCF_003002815.1 | unplaced scaffold | NZ_PVTF01000020.1 | 83867 | 85084 | + |
| cl00083 | HNHc (WHH) | WP_106341760.1 | HNH endonuclease | CLV36_RS03380 | 589 | GCF_003003125.1 | unplaced scaffold | NZ_PVTZ01000002.1 | 121816 | 123585 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_073069178.1 | DUF4157 domain-containing protein | C7B65_RS01785 | 1397 | GCF_003003695.1 | unplaced scaffold | NZ_PVWG01000001.1 | 392997 | 397190 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_106669788.1 | S-type pyocin domain-containing protein | C7H08_RS00375 | 532 | GCF_003007685.1 | unplaced scaffold | NZ_PXNN01000003.1 | 77164 | 78762 | + |
| cl00083 | HNHc (WHH) | WP_106696115.1 | S-type pyocin domain-containing protein | C7H10_RS19085 | 446 | GCF_003007715.1 | unplaced scaffold | NZ_PXNO01000028.1 | 123239 | 124579 | - |
| cl00083 | HNHc (WHH) | WP_149615758.1 | HNH endonuclease | C6Y53_RS20400 | 567 | GCF_003008555.2 | plasmid | NZ_CP043621.1 | 33783 | 35486 | + |
| cl16862 | AHH | WP_106715312.1 | hemagglutinin repeat-containing protein | CU100_RS04560 | 3030 | GCF_003010935.1 | unplaced scaffold | NZ_PGGN01000001.1 | 965236 | 974328 | + |