| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_181234175.1 | hypothetical protein | ENSA7_RS27555 | 1850 | GCF_002994635.1 | unplaced scaffold | NZ_PVNL01000111.1 | 25175 | 30727 | + |
| cl00083 | HNHc (WHH) | WP_181234642.1 | HNH endonuclease | ENSA7_RS41275 | 577 | GCF_002994635.1 | unplaced scaffold | NZ_PVNL01000170.1 | 1033 | 2768 | - |
| cl21444 | Tox-SHH | WP_106398913.1 | toxin | C2865_RS14095 | 2659 | GCF_002995495.1 | unplaced scaffold | NZ_PVZV01000003.1 | 222167 | 230146 | - |
| cl00222 | Lyz-like | WP_106236480.1 | transglycosylase SLT domain-containing protein | B0I32_RS08285 | 374 | GCF_003001935.1 | unplaced scaffold | NZ_PVNG01000003.1 | 266130 | 267254 | - |
| cl00173 | VIP2 | WP_106239691.1 | ADP-ribosyltransferase domain-containing protein | B0I32_RS16235 | 623 | GCF_003001935.1 | unplaced scaffold | NZ_PVNG01000006.1 | 245385 | 247256 | - |
| cl26675 | COG5529 | WP_146178316.1 | DUF6531 domain-containing protein | B0I32_RS25705 | 1473 | GCF_003001935.1 | unplaced scaffold | NZ_PVNG01000011.1 | 206947 | 211368 | + |
| cl21406 | CdiA-CT_Ec_tRNase | WP_106178052.1 | DNRLRE domain-containing protein | B0I33_RS08780 | 2723 | GCF_003001955.1 | unplaced scaffold | NZ_PVNH01000003.1 | 442416 | 450587 | + |
| cl00222 | Lyz-like | WP_106178991.1 | transglycosylase SLT domain-containing protein | B0I33_RS12910 | 382 | GCF_003001955.1 | unplaced scaffold | NZ_PVNH01000005.1 | 47859 | 49007 | - |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_106127690.1 | polymorphic toxin-type HINT domain-containing protein | CLV70_RS18000 | 2261 | GCF_003002065.1 | unplaced scaffold | NZ_PVZG01000008.1 | 21078 | 27863 | - |
| cl41215 | CdiA-CT_5T87E_Ct | WP_106128162.1 | polymorphic toxin-type HINT domain-containing protein | CLV70_RS20645 | 2231 | GCF_003002065.1 | unplaced scaffold | NZ_PVZG01000009.1 | 248503 | 255198 | - |