| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00222 | Lyz-like | WP_093932437.1 | transglycosylase SLT domain-containing protein | CFP71_RS03835 | 371 | GCF_002234405.1 | unplaced scaffold | NZ_NMQT01000015.1 | 15490 | 16605 | - |
| cl00222 | Lyz-like | WP_093935469.1 | transglycosylase SLT domain-containing protein | CFP71_RS20425 | 364 | GCF_002234405.1 | unplaced scaffold | NZ_NMQT01000072.1 | 43625 | 44719 | - |
| cl00222 | Lyz-like | WP_093946028.1 | transglycosylase SLT domain-containing protein | CF165_RS03935 | 379 | GCF_002234595.1 | unplaced scaffold | NZ_NMUL01000005.1 | 83245 | 84384 | + |
| cl30079 | OmpA_C-like | WP_093951046.1 | DUF4157 domain-containing protein | CF165_RS30520 | 755 | GCF_002234595.1 | unplaced scaffold | NZ_NMUL01000033.1 | 136911 | 139178 | + |
| cl21441 | Tox-REase-7 | WP_093953283.1 | putative toxin | CF165_RS42660 | 1382 | GCF_002234595.1 | unplaced scaffold | NZ_NMUL01000061.1 | 15751 | 19899 | - |
| cl16881 | EndoU | WP_244188473.1 | EndoU domain-containing protein | B4V02_RS07265 | 1031 | GCF_002240415.1 | chromosome | NZ_CP020028.1 | 1628948 | 1632043 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_094155242.1 | WXG100 family type VII secretion target | B4V02_RS13820 | 407 | GCF_002240415.1 | chromosome | NZ_CP020028.1 | 3124514 | 3125737 | - |
| cl26675 | COG5529 | WP_094229181.1 | hypothetical protein | BB781_RS14490 | 387 | GCF_002243045.1 | unplaced scaffold | NZ_MBKP01000065.1 | 16579 | 17742 | - |
| cl26675 | COG5529 | WP_207205303.1 | HNH endonuclease | BB781_RS14500 | 439 | GCF_002243045.1 | unplaced scaffold | NZ_MBKP01000065.1 | 18433 | 19754 | - |
| cl26675 | COG5529 | WP_094229256.1 | hypothetical protein | BB781_RS15000 | 311 | GCF_002243045.1 | unplaced scaffold | NZ_MBKP01000083.1 | 3289 | 4224 | - |