| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_088135061.1 | S-type pyocin domain-containing protein | BSQ33_RS19820 | 521 | GCF_002196515.1 | chromosome | NZ_CP018836.1 | 930523 | 932088 | - |
| cl00083 | HNHc (WHH) | WP_088135102.1 | S-type pyocin domain-containing protein | BSQ33_RS20075 | 521 | GCF_002196515.1 | chromosome | NZ_CP018836.1 | 991101 | 992666 | - |
| cl16881 | EndoU | WP_088270128.1 | EndoU domain-containing protein | CC204_RS10770 | 511 | GCF_002197645.1 | chromosome | NZ_CP021874.1 | 2169459 | 2170994 | - |
| cl16881 | EndoU | WP_088270784.1 | EndoU domain-containing protein | CC204_RS14300 | 487 | GCF_002197645.1 | chromosome | NZ_CP021874.1 | 2862283 | 2863746 | + |
| cl16881 | EndoU | WP_088270943.1 | EndoU domain-containing protein | CC204_RS15275 | 533 | GCF_002197645.1 | chromosome | NZ_CP021874.1 | 3045913 | 3047514 | + |
| cl16862 | AHH | WP_238602643.1 | AHH domain-containing protein | FRUB_RS56995 | 1853 | GCF_002197845.1 | unplaced scaffold | NZ_NIDE01000004.1 | 1391545 | 1397106 | + |
| cl41214 | CdiA-CT_Ec-like | WP_088255972.1 | Hint domain-containing protein | FRUB_RS23285 | 536 | GCF_002197845.1 | unplaced scaffold | NZ_NIDE01000007.1 | 263884 | 265494 | - |
| cl16544 | TNT | WP_088255973.1 | glycohydrolase toxin TNT-related protein | FRUB_RS23305 | 469 | GCF_002197845.1 | unplaced scaffold | NZ_NIDE01000007.1 | 268702 | 270111 | - |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_123867167.1 | minor capsid protein | BWK62_RS09410 | 426 | GCF_002204835.1 | unplaced scaffold | NZ_MTCY01000025.1 | 17470 | 18750 | + |
| cl00083 | HNHc (WHH) | WP_158218954.1 | HNH endonuclease | CDN99_RS24580 | 234 | GCF_002205645.1 | unplaced scaffold | NZ_NIOF01000016.1 | 127784 | 128488 | - |