| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_013286218.1 | WXG100 family type VII secretion target | MICAU_RS15230 | 398 | GCF_000145235.1 | chromosome | NC_014391.1 | 3464891 | 3466087 | - |
| cl00173 | VIP2 | WP_013291883.1 | minor capsid protein | CLOCEL_RS22445 | 477 | GCF_000145275.1 | chromosome | NC_014393.1 | 4317536 | 4318969 | - |
| cl00083 | HNHc (WHH) | WP_242655284.1 | HNH endonuclease | CLOCEL_RS17945 | 198 | GCF_000145275.1 | chromosome | NC_014393.1 | 4359174 | 4359770 | - |
| cl16862 | AHH | WP_147232496.1 | DUF6531 domain-containing protein | PSYTB_RS27620 | 1407 | GCF_000145945.2 | chromosome | NZ_CP042804.1 | 5873957 | 5878180 | + |
| cl00173 | VIP2 | WP_008902426.1 | minor capsid protein | HMPREF9225_RS07955 | 838 | GCF_000146345.1 | unlocalized scaffold on chromosome | NZ_GL397071.1 | 1749481 | 1751997 | - |
| cl21494 | Abhydrolase | WP_013317122.1 | PAAR domain-containing protein | DDA3937_RS06955 | 456 | GCF_000147055.1 | chromosome | NC_014500.1 | 1557550 | 1558920 | + |
| cl00083 | HNHc (WHH) | WP_013318569.1 | DUF6531 domain-containing protein | DDA3937_RS13755 | 1436 | GCF_000147055.1 | chromosome | NC_014500.1 | 3131418 | 3135728 | - |
| cl21427 | Tox-GHH2 | WP_005002912.1 | DUF4150 domain-containing protein | NB231_RS11410 | 325 | GCF_000153205.1 | unplaced scaffold | NZ_CH672427.1 | 2507208 | 2508185 | + |
| cl16862 | AHH | WP_162014329.1 | AHH domain-containing protein | KAOT1_RS02145 | 658 | GCF_000154725.1 | unplaced scaffold | NZ_DS544873.1 | 478809 | 480785 | + |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_006102290.1 | DUF4157 domain-containing protein | MC7420_RS35415 | 560 | GCF_000155555.1 | unplaced scaffold | NZ_DS989853.1 | 34637 | 36319 | - |