| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16881 | EndoU | WP_012367860.1 | EndoU domain-containing protein | PMI_RS05435 | 1703 | GCF_000069965.1 | chromosome | NC_010554.1 | 1189744 | 1194855 | + |
| cl13533 | Colicin_E5 | WP_012368150.1 | colicin | PMI_RS19495 | 441 | GCF_000069965.1 | chromosome | NC_010554.1 | 2054883 | 2056208 | - |
| cl01480 | DUF2235 | WP_004157712.1 | PAAR domain-containing protein | EAMY_RS26110 | 629 | GCF_000091565.1 | chromosome | NC_013961.1 | 1952426 | 1954315 | + |
| cl00083 | HNHc (WHH) | WP_004164647.1 | PAAR domain-containing protein | EAMY_RS28990 | 1426 | GCF_000091565.1 | chromosome | NC_013961.1 | 2604838 | 2609118 | + |
| cl21449 | Tox-HNH-EHHH | WP_004159529.1 | PAAR domain-containing protein | EAMY_RS30225 | 1415 | GCF_000091565.1 | chromosome | NC_013961.1 | 2867965 | 2872212 | - |
| cl01480 | DUF2235 | WP_004159968.1 | DUF2235 domain-containing protein | EAMY_RS31420 | 635 | GCF_000091565.1 | chromosome | NC_013961.1 | 3152923 | 3154830 | - |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_013181713.1 | DUF6531 domain-containing protein | WCW_RS02970 | 1719 | GCF_000092785.1 | chromosome | NC_014225.1 | 670897 | 676056 | + |
| cl41756 | PoNe | WP_013117746.1 | pre-toxin TG domain-containing protein | CFLA_RS12755 | 321 | GCF_000092865.1 | chromosome | NC_014151.1 | 2833678 | 2834643 | - |
| cl30079 | OmpA_C-like | WP_013256216.1 | OmpA family protein | SPIRS_RS18520 | 343 | GCF_000143985.1 | chromosome | NC_014364.1 | 3957638 | 3958669 | + |
| cl16625 | Tae4 | WP_013265501.1 | T6SS effector amidase Tae4 family protein | HMPREF0659_RS10270 | 2023 | GCF_000144405.1 | chromosome | NC_014371.1 | 825377 | 831448 | - |