| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_007175459.1 | phage minor head protein | HMPREF0645_RS13050 | 468 | GCF_000160535.1 | unplaced scaffold | NZ_GG704787.1 | 29830 | 31236 | + |
| cl16881 | EndoU | WP_033798743.1 | EndoU domain-containing protein | BPMYX0001_RS05695 | 539 | GCF_000161455.1 | chromosome | NZ_CM000745.1 | 1161694 | 1163313 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_033798856.1 | T7SS effector LXG polymorphic toxin | BPMYX0001_RS10185 | 536 | GCF_000161455.1 | chromosome | NZ_CM000745.1 | 2043583 | 2045193 | - |
| cl21449 | Tox-HNH-EHHH | WP_000249941.1 | WXG100 family type VII secretion target | BTHUR0008_RS30485 | 305 | GCF_000161615.1 | chromosome | NZ_CM000753.1 | 6038715 | 6039632 | - |
| cl16544 | TNT | WP_008519373.1 | prophage LambdaCh01, head morphogeneis protein, SPP1 gp7 family | GCWU000246_RS09190 | 203 | GCF_000161995.1 | unplaced scaffold | NZ_GG697147.2 | 828 | 1439 | - |
| cl00173 | VIP2 | WP_008519382.1 | capsid protein | GCWU000246_RS08675 | 308 | GCF_000161995.1 | unplaced scaffold | NZ_GG697147.2 | 2679 | 3605 | - |
| cl00173 | VIP2 | WP_039879622.1 | hypothetical protein | GCWU000246_RS07550 | 335 | GCF_000161995.1 | unplaced scaffold | NZ_GG697147.2 | 1568186 | 1569193 | - |
| cl16544 | TNT | WP_007005178.1 | glycohydrolase toxin TNT-related protein | HMPREF0731_RS23280 | 429 | GCF_000164635.1 | unplaced scaffold | NZ_GG770781.1 | 153108 | 154397 | - |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_013397660.1 | DUF6531 domain-containing protein | HMPREF0733_RS01695 | 2330 | GCF_000164695.2 | chromosome | NC_014643.1 | 382566 | 389558 | + |
| cl21494 | Abhydrolase | WP_049775419.1 | DUF6531 domain-containing protein | HMPREF0733_RS02370 | 2082 | GCF_000164695.2 | chromosome | NC_014643.1 | 542141 | 548389 | - |