| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16881 | EndoU | WP_052732735.1 | EndoU domain-containing protein | WX88_RS27750 | 413 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000012.1 | 131854 | 133095 | + |
| cl41756 | PoNe | WP_052732858.1 | hypothetical protein | WX88_RS27995 | 346 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000019.1 | 61842 | 62882 | + |
| cl00083 | HNHc (WHH) | WP_052732912.1 | HNH endonuclease | WX88_RS28060 | 458 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000023.1 | 26217 | 27593 | - |
| cl00083 | HNHc (WHH) | WP_046246537.1 | HNH endonuclease | WX88_RS21805 | 386 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000027.1 | 41038 | 42198 | + |
| cl00083 | HNHc (WHH) | WP_046246770.1 | HNH endonuclease | WX88_RS22980 | 386 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000032.1 | 29122 | 30282 | - |
| cl16862 | AHH | WP_052733150.1 | DUF4280 domain-containing protein | WX88_RS28450 | 288 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000096.1 | 830 | 1696 | - |
| cl21405 | Ntox15 | WP_046247492.1 | polymorphic toxin type 15 domain-containing protein | WX88_RS31180 | 241 | GCF_000972495.1 | unplaced scaffold | NZ_LATM01000116.1 | 1 | 723 | - |
| cl00064 | Peptidase_M54 | WP_013995247.1 | hypothetical protein | ZOBGAL_RS18445 | 657 | GCF_000973105.1 | chromosome | NC_015844.1 | 4611702 | 4613675 | + |
| cl21428 | Tox-GHH | WP_046308822.1 | DUF6443 domain-containing protein | PKOR_RS01875 | 2078 | GCF_000973725.1 | chromosome | NZ_CP009621.1 | 455446 | 461682 | - |
| cl00222 | Lyz-like | WP_236703032.1 | transglycosylase SLT domain-containing protein | AOM45_RS00670 | 389 | GCF_000974445.1 | unplaced scaffold | NZ_BBOJ01000001.1 | 133647 | 134816 | - |