| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21344 | Ntox47 | WP_244884014.1 | polymorphic toxin type 47 domain-containing protein | T336_RS26385 | 173 | GCF_000687165.1 | unplaced scaffold | NZ_JMKU01000069.1 | 730 | 1253 | - |
| cl05417 | PLA2_like | WP_026441640.1 | hypothetical protein | N655_RS0101935 | 359 | GCF_000688455.1 | unplaced scaffold | NZ_JIAL01000001.1 | 416980 | 418059 | + |
| cl19110 | CDI_toxin_EC869_like | WP_026381139.1 | minor capsid protein | Q331_RS0113625 | 546 | GCF_000688515.1 | unplaced scaffold | NZ_JHZK01000020.1 | 13627 | 15267 | - |
| cl21328 | Ntox17 | WP_200872193.1 | polymorphic toxin type 17 domain-containing protein | EA58_RS16130 | 743 | GCF_000695255.1 | unplaced scaffold | NZ_JMIB01000032.1 | 54695 | 56926 | + |
| cl00222 | Lyz-like | WP_043775717.1 | transglycosylase SLT domain-containing protein | DV20_RS01630 | 381 | GCF_000695625.1 | unplaced scaffold | NZ_JMQI01000003.1 | 5414 | 6559 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_051653821.1 | polymorphic toxin-type HINT domain-containing protein | KCH_RS38360 | 1532 | GCF_000696185.1 | unplaced scaffold | NZ_KK853997.1 | 7947424 | 7952022 | - |
| cl41215 | CdiA-CT_5T87E_Ct | WP_051654114.1 | DUF6531 domain-containing protein | KCH_RS36245 | 1302 | GCF_000696185.1 | unplaced scaffold | NZ_KK853998.1 | 70759 | 74667 | + |
| cl41756 | PoNe | WP_171816062.1 | DUF637 domain-containing protein | SRAH_RS11675 | 597 | GCF_000696225.1 | unplaced scaffold | NZ_BAWN01000068.1 | 1 | 1791 | - |
| cl21346 | Ntox50 | WP_236633868.1 | hemagglutinin repeat-containing protein | ET34_RS0113510 | 797 | GCF_000696575.1 | unplaced scaffold | NZ_JMSQ01000011.1 | 53097 | 55490 | + |
| cl21344 | Ntox47 | WP_156952911.1 | polymorphic toxin type 47 domain-containing protein | Q322_RS24445 | 182 | GCF_000701425.1 | unplaced scaffold | NZ_JNIW01000011.1 | 32930 | 33478 | - |