| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00222 | Lyz-like | WP_038521467.1 | transglycosylase SLT domain-containing protein | AJAP_RS40230 | 372 | GCF_000732925.1 | chromosome | NZ_CP008953.1 | 8639871 | 8640989 | - |
| cl00083 | HNHc (WHH) | WP_052517842.1 | HNH endonuclease | Q664_RS51765 | 283 | GCF_000733295.1 | unplaced scaffold | NZ_JPMI01000048.1 | 15735 | 16586 | - |
| cl00083 | HNHc (WHH) | WP_052518638.1 | HNH endonuclease | Q664_RS52625 | 286 | GCF_000733295.1 | unplaced scaffold | NZ_JPMI01000173.1 | 20268 | 21128 | + |
| cl16862 | AHH | WP_017363568.1 | DUF6531 domain-containing protein | DW68_RS23560 | 1483 | GCF_000733715.2 | chromosome | NZ_CP013124.1 | 5071802 | 5076253 | - |
| cl21449 | Tox-HNH-EHHH | WP_031431583.1 | HNH/endonuclease VII fold putative polymorphic toxin | CC94_RS22495 | 415 | GCF_000733855.1 | unplaced scaffold | NZ_JPOJ01000001.1 | 3486653 | 3487900 | - |
| cl00083 | HNHc (WHH) | WP_245619814.1 | HNH endonuclease | CC94_RS0119585 | 795 | GCF_000733855.1 | unplaced scaffold | NZ_JPOJ01000001.1 | 4228000 | 4230387 | + |
| cl16862 | AHH | WP_084675401.1 | AHH domain-containing protein | CC94_RS0119685 | 1425 | GCF_000733855.1 | unplaced scaffold | NZ_JPOJ01000001.1 | 4257143 | 4261420 | - |
| cl01480 | DUF2235 | WP_038154773.1 | type VI secretion system tube protein Hcp | GTGU_RS05515 | 661 | GCF_000734965.1 | unplaced scaffold | NZ_JMTB01000043.1 | 127964 | 129949 | - |
| cl21406 | CdiA-CT_Ec_tRNase | WP_038156365.1 | hemagglutinin repeat-containing protein | GTGU_RS10215 | 3299 | GCF_000734965.1 | unplaced scaffold | NZ_JMTB01000067.1 | 620 | 10519 | + |
| cl12957 | Colicin_D | WP_051857404.1 | hemagglutinin repeat-containing protein | GTGU_RS21145 | 3596 | GCF_000734965.1 | unplaced scaffold | NZ_JMTB01000117.1 | 137540 | 148330 | + |