| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_226732751.1 | hypothetical protein | LG634_RS06710 | 746 | GCF_020532645.1 | unplaced scaffold | NZ_JAJAUZ010000006.1 | 169444 | 171684 | + |
| cl00296 | Peptidase_C39_like | WP_227108305.1 | hemagglutinin repeat-containing protein | JC616_RS11200 | 3178 | GCF_020544465.1 | chromosome | NZ_CP066126.1 | 2470347 | 2479883 | + |
| cl21346 | Ntox50 | WP_229386866.1 | polymorphic toxin type 50 domain-containing protein | EYB33_RS12960 | 514 | GCF_020546525.1 | chromosome | NZ_CP053370.1 | 2545835 | 2547379 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_227460737.1 | filamentous hemagglutinin N-terminal domain-containing protein | LAD66_RS21220 | 2585 | GCF_020667815.1 | unplaced scaffold | NZ_JAIQWY010000002.1 | 945726 | 953483 | + |
| cl16881 | EndoU | WP_229524204.1 | EndoU domain-containing protein | JO375_RS09360 | 1805 | GCF_020736845.1 | unplaced scaffold | NZ_JAFFQR010000063.1 | 120393 | 125810 | + |
| cl21449 | Tox-HNH-EHHH | WP_228109687.1 | Hint domain-containing protein | K0040_RS15600 | 578 | GCF_020748185.1 | unplaced scaffold | NZ_JAHZMO010000036.1 | 3405 | 5141 | - |
| cl41214 | CdiA-CT_Ec-like | WP_228109704.1 | Hint domain-containing protein | K0040_RS15695 | 557 | GCF_020748185.1 | unplaced scaffold | NZ_JAHZMO010000036.1 | 24473 | 26146 | - |
| cl07564 | Cytotoxic | WP_228109710.1 | Hint domain-containing protein | K0040_RS15745 | 359 | GCF_020748185.1 | unplaced scaffold | NZ_JAHZMO010000036.1 | 32657 | 33738 | - |
| cl21328 | Ntox17 | WP_228110404.1 | polymorphic toxin type 17 domain-containing protein | K0040_RS19755 | 247 | GCF_020748185.1 | unplaced scaffold | NZ_JAHZMO010000091.1 | 930 | 1675 | - |
| cl00064 | Peptidase_M54 | WP_229498233.1 | PKD domain-containing protein | LC653_RS29695 | 10140 | GCF_020829645.1 | unplaced scaffold | NZ_JAIVFS010000065.1 | 7863 | 38285 | - |