| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_207629026.1 | HNH endonuclease | C5469_RS13410 | 189 | GCF_011189575.1 | unplaced scaffold | NZ_PUJW01000013.1 | 1 | 572 | + |
| cl19110 | CDI_toxin_EC869_like | WP_242689579.1 | DUF637 domain-containing protein | C5469_RS23945 | 322 | GCF_011189575.1 | unplaced scaffold | NZ_PUJW01000117.1 | 1 | 965 | - |
| cl12957 | Colicin_D | WP_166174696.1 | DUF6531 domain-containing protein | G9H72_RS20555 | 1662 | GCF_011250645.1 | unplaced scaffold | NZ_JAANNO010000025.1 | 7462 | 12450 | - |
| cl01480 | DUF2235 | WP_166406767.1 | DUF2235 domain-containing protein | GY634_RS01280 | 1183 | GCF_011290505.1 | unplaced scaffold | NZ_JAANPV010000001.1 | 281138 | 284689 | - |
| cl16881 | EndoU | WP_166381013.1 | EndoU domain-containing protein | HAV40_RS11950 | 2290 | GCF_011297335.1 | unplaced scaffold | NZ_JAAOTJ010000003.1 | 281853 | 288725 | - |
| cl16862 | AHH | WP_166384730.1 | AHH domain-containing protein | HAV40_RS23375 | 2291 | GCF_011297335.1 | unplaced scaffold | NZ_JAAOTJ010000011.1 | 70116 | 76991 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_166292187.1 | hypothetical protein | G7068_RS12065 | 532 | GCF_011299575.1 | chromosome | NZ_CP049863.1 | 2775371 | 2776969 | - |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_166292494.1 | hypothetical protein | G7068_RS13820 | 533 | GCF_011299575.1 | chromosome | NZ_CP049863.1 | 3166393 | 3167994 | - |
| cl00083 | HNHc (WHH) | WP_166221127.1 | S-type pyocin domain-containing protein | F2P67_RS14530 | 416 | GCF_011369485.1 | unplaced scaffold | NZ_VXCA01000023.1 | 29411 | 30661 | - |
| cl01480 | DUF2235 | WP_166221909.1 | type VI secretion system tip protein VgrG | F2P67_RS17215 | 1117 | GCF_011369485.1 | unplaced scaffold | NZ_VXCA01000025.1 | 351488 | 354841 | + |