| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_231984224.1 | S-type pyocin domain-containing protein | G5J76_RS06730 | 621 | GCF_011040435.1 | chromosome | NZ_CP049044.1 | 1488306 | 1490171 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_164691399.1 | WXG100 family type VII secretion target | GM610_RS27080 | 474 | GCF_011040455.1 | plasmid | NZ_CP049020.1 | 32094 | 33518 | - |
| cl00083 | HNHc (WHH) | WP_164482156.1 | PAAR domain-containing protein | G5574_RS04995 | 1412 | GCF_011044475.1 | chromosome | NZ_CP049115.1 | 1071420 | 1075658 | + |
| cl26675 | COG5529 | WP_165343987.1 | hypothetical protein | G6048_RS37070 | 1189 | GCF_011045025.1 | unplaced scaffold | NZ_JAAKZX010000183.1 | 481 | 4050 | + |
| cl21446 | Tox-WTIP | WP_165011402.1 | DUF4157 domain-containing protein | G5S52_RS00950 | 512 | GCF_011045095.1 | unplaced scaffold | NZ_JAALDL010000001.1 | 215839 | 217377 | + |
| cl00083 | HNHc (WHH) | WP_165012636.1 | HNH endonuclease | G5S52_RS08080 | 283 | GCF_011045095.1 | unplaced scaffold | NZ_JAALDL010000004.1 | 247044 | 247895 | + |
| cl01480 | DUF2235 | WP_235956148.1 | DUF2235 domain-containing protein | G5S52_RS08425 | 877 | GCF_011045095.1 | unplaced scaffold | NZ_JAALDL010000004.1 | 311652 | 314285 | + |
| cl41756 | PoNe | WP_165018865.1 | hypothetical protein | G5S52_RS23340 | 442 | GCF_011045095.1 | unplaced scaffold | NZ_JAALDL010000038.1 | 2027 | 3355 | - |
| cl38048 | Peptidase_M23 | WP_165030894.1 | filamentous hemagglutinin N-terminal domain-containing protein | G6N73_RS20340 | 1263 | GCF_011045125.1 | unplaced scaffold | NZ_JAAKZF010000032.1 | 52275 | 56066 | + |
| cl21494 | Abhydrolase | WP_165183542.1 | hypothetical protein | G6N77_RS17975 | 483 | GCF_011045165.1 | unplaced scaffold | NZ_JAAKZI010000045.1 | 23068 | 24519 | + |