| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00173 | VIP2 | WP_139989257.1 | minor capsid protein | F2S80_RS08355 | 457 | GCF_008605885.1 | unplaced scaffold | NZ_VXDF01000007.1 | 76466 | 77839 | + |
| cl21330 | CdiA-CT_Ecl_RNase-like | WP_150011752.1 | toxin C-terminal domain-containing protein | F0460_RS07325 | 3666 | GCF_008629655.1 | unplaced scaffold | NZ_VWSG01000004.1 | 175703 | 186703 | - |
| cl16861 | LHH | WP_161604459.1 | hypothetical protein | FYK55_RS11925 | 409 | GCF_008629675.1 | unplaced scaffold | NZ_VWOX01000005.1 | 482657 | 483886 | + |
| cl07564 | Cytotoxic | WP_150065428.1 | colicin E3/pyocin S6 family cytotoxin | F1721_RS05570 | 1404 | GCF_008630535.1 | unplaced scaffold | NZ_VWPH01000002.1 | 530977 | 535191 | + |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_211840568.1 | pre-toxin TG domain-containing protein | F1721_RS34815 | 529 | GCF_008630535.1 | unplaced scaffold | NZ_VWPH01000010.1 | 121733 | 123322 | + |
| cl00222 | Lyz-like | WP_246155307.1 | WXG100 family type VII secretion target | F1721_RS25785 | 392 | GCF_008630535.1 | unplaced scaffold | NZ_VWPH01000013.1 | 45393 | 46571 | + |
| cl41756 | PoNe | WP_150069680.1 | hypothetical protein | F1721_RS27405 | 1588 | GCF_008630535.1 | unplaced scaffold | NZ_VWPH01000014.1 | 135649 | 140415 | + |
| cl41756 | PoNe | WP_150083009.1 | hypothetical protein | F1599_RS10420 | 477 | GCF_008632125.1 | unplaced scaffold | NZ_VWRN01000030.1 | 93684 | 95117 | + |
| cl00083 | HNHc (WHH) | WP_045544316.1 | DUF637 domain-containing protein | F3P16_RS11965 | 1898 | GCF_008632635.1 | chromosome | NZ_CP043953.1 | 2533605 | 2539301 | - |
| cl07564 | Cytotoxic | WP_244410000.1 | colicin E3/pyocin S6 family cytotoxin | CP973_RS25325 | 1180 | GCF_008634025.1 | unplaced scaffold | NZ_PDCM01000002.1 | 1123333 | 1126875 | - |