| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_148284133.1 | Hint domain-containing protein | KDY119_RS09995 | 603 | GCF_009429125.1 | chromosome | NZ_CP045529.1 | 2234038 | 2235849 | + |
| cl41214 | CdiA-CT_Ec-like | WP_227995879.1 | hypothetical protein | GFD30_RS26705 | 1118 | GCF_009451885.1 | unplaced scaffold | NZ_WIAO01000004.1 | 162662 | 166018 | - |
| cl21440 | Tox-REase-5 | WP_246216218.1 | filamentous hemagglutinin N-terminal domain-containing protein | GH665_RS14540 | 2825 | GCF_009455635.1 | unplaced scaffold | NZ_QPER01000001.1 | 3313893 | 3322370 | - |
| cl16862 | AHH | WP_153165425.1 | DUF6531 domain-containing protein | GDJ08_RS18020 | 1561 | GCF_009467805.1 | unplaced scaffold | NZ_WIAY01000008.1 | 51978 | 56663 | - |
| cl00083 | HNHc (WHH) | WP_153214965.1 | HNH endonuclease | GFB49_RS06250 | 292 | GCF_009496005.1 | unplaced scaffold | NZ_WIBF01000002.1 | 416912 | 417790 | + |
| cl00222 | Lyz-like | WP_139628391.1 | transglycosylase SLT domain-containing protein | GBF35_RS06160 | 388 | GCF_009497075.1 | chromosome | NZ_CP045572.1 | 1239474 | 1240640 | + |
| cl41764 | CdiA-CT_Ec_Kp-like | WP_230211065.1 | hypothetical protein | F7Q99_RS29395 | 1351 | GCF_009569385.1 | unplaced scaffold | NZ_WBOF01000002.1 | 411802 | 415857 | - |
| cl21494 | Abhydrolase | WP_230211094.1 | hypothetical protein | F7Q99_RS41880 | 467 | GCF_009569385.1 | unplaced scaffold | NZ_WBOF01000002.1 | 706713 | 708116 | + |
| cl21405 | Ntox15 | WP_153344727.1 | DUF4157 domain-containing protein | GHC57_RS12515 | 1608 | GCF_009601025.1 | unplaced scaffold | NZ_WIVE01000039.1 | 34287 | 39114 | - |
| cl13533 | Colicin_E5 | WP_167528179.1 | hypothetical protein | GHK62_RS33495 | 1391 | GCF_009601505.1 | unplaced scaffold | NZ_WITC01000033.1 | 18286 | 22461 | + |