| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl00083 | HNHc (WHH) | WP_076930553.1 | HNH endonuclease | PSM36_RS08480 | 2576 | GCF_900095135.1 | chromosome | NZ_LT605205.1 | 2165412 | 2173142 | + |
| cl16881 | EndoU | WP_083232327.1 | hemagglutinin repeat-containing protein | BQ2505_RS08960 | 2644 | GCF_900095705.1 | unplaced scaffold | NZ_LT608327.1 | 482643 | 490577 | - |
| cl21346 | Ntox50 | WP_083232329.1 | polymorphic toxin type 50 domain-containing protein | BQ2505_RS08990 | 886 | GCF_900095705.1 | unplaced scaffold | NZ_LT608327.1 | 629285 | 631945 | - |
| cl00212 | microbial_Rnases (Ribonuclease) | WP_074017122.1 | hemagglutinin repeat-containing protein | BQ2505_RS07395 | 2673 | GCF_900095705.1 | unplaced scaffold | NZ_LT608327.1 | 634036 | 642057 | - |
| cl21405 | Ntox15 | WP_167350216.1 | polymorphic toxin type 15 domain-containing protein | BQ2679_RS10500 | 244 | GCF_900095845.1 | unplaced scaffold | NZ_FMIX01000004.1 | 533785 | 534519 | - |
| cl00173 | VIP2 | WP_069987175.1 | minor capsid protein | BQ2683_RS02420 | 743 | GCF_900095865.1 | unplaced scaffold | NZ_FMIZ01000006.1 | 19738 | 21969 | - |
| cl21449 | Tox-HNH-EHHH | WP_180706091.1 | hemagglutinin repeat-containing protein | DAQ1742_RS10765 | 1313 | GCF_900095885.1 | chromosome | NZ_LT615367.1 | 2390469 | 2394410 | - |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_092438618.1 | minor capsid protein | BLS65_RS10230 | 423 | GCF_900096565.1 | unplaced scaffold | NZ_FMYP01000035.1 | 28584 | 29855 | + |
| cl21346 | Ntox50 | WP_228143283.1 | polymorphic toxin type 50 domain-containing protein | BLP85_RS15055 | 231 | GCF_900096895.1 | unplaced scaffold | NZ_FMYO01000005.1 | 104760 | 105455 | - |
| cl21406 | CdiA-CT_Ec_tRNase | WP_207648924.1 | polymorphic toxin type 28 domain-containing protein | BJR36_RS19590 | 918 | GCF_900096945.1 | unplaced scaffold | NZ_FMKA01000072.1 | 1 | 2758 | + |