| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16862 | AHH | WP_173603344.1 | DUF6531 domain-containing protein | HRH33_RS00335 | 1459 | GCF_013285305.1 | chromosome | NZ_CP054205.1 | 72397 | 76776 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_173603442.1 | DUF6531 domain-containing protein | HRH33_RS10850 | 1576 | GCF_013285305.1 | chromosome | NZ_CP054205.1 | 2362273 | 2367003 | - |
| cl00083 | HNHc (WHH) | WP_243269861.1 | HNH endonuclease | HRH33_RS13580 | 715 | GCF_013285305.1 | chromosome | NZ_CP054205.1 | 2985560 | 2987707 | - |
| cl16881 | EndoU | WP_174140074.1 | EndoU domain-containing protein | HRQ87_RS19270 | 321 | GCF_013315265.1 | unplaced scaffold | NZ_JABUFE010000024.1 | 17005 | 17970 | - |
| cl00083 | HNHc (WHH) | WP_174140119.1 | FG-GAP-like repeat-containing protein | HRQ87_RS19490 | 3314 | GCF_013315265.1 | unplaced scaffold | NZ_JABUFE010000027.1 | 4321 | 14265 | - |
| cl41756 | PoNe | WP_174200853.1 | contractile injection system protein, VgrG/Pvc8 family | HR060_RS13655 | 1176 | GCF_013328345.1 | unplaced scaffold | NZ_JABULX010000022.1 | 41988 | 45518 | - |
| cl19110 | CDI_toxin_EC869_like | WP_243451396.1 | DUF637 domain-containing protein | HUV26_RS16705 | 538 | GCF_013340305.1 | unplaced scaffold | NZ_BLVP01000013.1 | 4339 | 5955 | - |
| cl19110 | CDI_toxin_EC869_like | WP_174812790.1 | S8 family serine peptidase | HUB94_RS20835 | 2011 | GCF_013347265.1 | plasmid | NZ_CP054613.1 | 392125 | 398160 | - |
| cl41764 | CdiA-CT_Ec_Kp-like | WP_174812124.1 | WXG100 family type VII secretion target | HUB98_RS07200 | 418 | GCF_013347305.1 | chromosome | NZ_CP054614.1 | 1527248 | 1528504 | - |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_244964875.1 | WXG100 family type VII secretion target | HUB98_RS29430 | 480 | GCF_013347305.1 | chromosome | NZ_CP054614.1 | 4226982 | 4228424 | + |