| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl16861 | LHH | WP_229878759.1 | polymorphic toxin-type HINT domain-containing protein | CP982_RS33065 | 2294 | GCF_008704795.1 | chromosome | NZ_CP023690.1 | 7575047 | 7581931 | - |
| cl00083 | HNHc (WHH) | WP_150455234.1 | HNH endonuclease | FJU31_RS13635 | 290 | GCF_008710035.1 | unplaced scaffold | NZ_VYKI01000017.1 | 94396 | 95268 | - |
| cl00083 | HNHc (WHH) | WP_150435854.1 | DUF6531 domain-containing protein | FJU30_RS15415 | 1427 | GCF_008710095.1 | unplaced scaffold | NZ_VYKJ01000007.1 | 297792 | 302075 | + |
| cl00296 | Peptidase_C39_like | WP_137901404.1 | peptidase C39 | FZF13_RS21295 | 1500 | GCF_008727715.1 | chromosome | NZ_CP044218.1 | 4174620 | 4179122 | + |
| cl21441 | Tox-REase-7 | WP_151053765.1 | type VI secretion system tip protein VgrG | F5I99_RS19760 | 962 | GCF_008727795.1 | chromosome | NZ_CP044222.1 | 840255 | 843143 | + |
| cl21494 | Abhydrolase | WP_151053767.1 | type VI secretion system tip protein VgrG | F5I99_RS04045 | 1041 | GCF_008727795.1 | chromosome | NZ_CP044222.1 | 844795 | 847920 | + |
| cl21494 | Abhydrolase | WP_151054082.1 | type VI secretion system tip protein VgrG | F5I99_RS19775 | 1041 | GCF_008727795.1 | chromosome | NZ_CP044222.1 | 1269735 | 1272860 | + |
| cl00083 | HNHc (WHH) | WP_151176796.1 | HNH endonuclease | FRZ44_RS08600 | 695 | GCF_008728855.1 | chromosome | NZ_CP042906.1 | 1863731 | 1865818 | + |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_168215666.1 | DUF6531 domain-containing protein | FPL07_RS06025 | 1600 | GCF_008795935.1 | unplaced scaffold | NZ_VMHO01000001.1 | 1288977 | 1293779 | - |
| cl03449 | M35_like | WP_150991181.1 | hypothetical protein | F7R26_RS19285 | 255 | GCF_008801925.2 | chromosome | NZ_CP062803.1 | 4186647 | 4187414 | - |