| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_138579496.1 | minor capsid protein | FDP22_RS00375 | 352 | GCF_005887635.2 | chromosome | NZ_CP040818.1 | 88926 | 89984 | - |
| cl00222 | Lyz-like | WP_206058264.1 | transglycosylase SLT domain-containing protein | ETD85_RS12200 | 386 | GCF_005889725.1 | unplaced scaffold | NZ_VCKX01000028.1 | 50252 | 51412 | - |
| cl00222 | Lyz-like | WP_138695113.1 | transglycosylase SLT domain-containing protein | ETD85_RS40380 | 367 | GCF_005889725.1 | unplaced scaffold | NZ_VCKX01000178.1 | 15837 | 16940 | + |
| cl16862 | AHH | WP_138665998.1 | polymorphic toxin-type HINT domain-containing protein | ETD86_RS10820 | 2720 | GCF_005889735.1 | unplaced scaffold | NZ_VCKY01000027.1 | 9859 | 18021 | - |
| cl00222 | Lyz-like | WP_138712045.1 | transglycosylase SLT domain-containing protein | EJK15_RS20345 | 372 | GCF_005893125.1 | unplaced scaffold | NZ_VCJS01000040.1 | 4488 | 5606 | + |
| cl16881 | EndoU | WP_246096175.1 | EndoU domain-containing protein | FGT79_RS31800 | 544 | GCF_005930355.1 | unplaced scaffold | NZ_VDBO01000001.1 | 1342457 | 1344091 | - |
| cl21427 | Tox-GHH2 | WP_017839430.1 | DUF4150 domain-containing protein | EQU24_RS11140 | 376 | GCF_005931095.1 | chromosome | NZ_CP035467.1 | 2487199 | 2488329 | - |
| cl24743 | DUF4923 | WP_017839423.1 | type VI secretion system tip protein VgrG | EQU24_RS11175 | 710 | GCF_005931095.1 | chromosome | NZ_CP035467.1 | 2492071 | 2494203 | - |
| cl07564 | Cytotoxic | WP_235889749.1 | hemagglutinin repeat-containing protein | FGI60_RS26400 | 3157 | GCF_005938105.1 | unplaced scaffold | NZ_VCPE01000003.1 | 253079 | 262552 | + |
| cl41756 | PoNe | WP_138852223.1 | DUF4280 domain-containing protein | FGM00_RS07085 | 379 | GCF_005943945.1 | chromosome | NZ_CP040710.1 | 1735126 | 1736265 | - |