| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl30079 | OmpA_C-like | WP_205435314.1 | DUF6443 domain-containing protein | E0W68_RS03080 | 1618 | GCF_004634195.1 | unplaced scaffold | NZ_SKBP01000002.1 | 10305 | 15161 | - |
| cl00064 | Peptidase_M54 | WP_135218870.1 | DUF4157 domain-containing protein | E0W68_RS07825 | 432 | GCF_004634195.1 | unplaced scaffold | NZ_SKBP01000005.1 | 110166 | 111464 | - |
| cl16862 | AHH | WP_135218986.1 | AHH domain-containing protein | E0W68_RS08440 | 620 | GCF_004634195.1 | unplaced scaffold | NZ_SKBP01000005.1 | 225046 | 226908 | + |
| cl00083 | HNHc (WHH) | WP_135212625.1 | HNH endonuclease | EPJ54_RS15455 | 3540 | GCF_004634425.1 | unplaced scaffold | NZ_SBJL01000003.1 | 510651 | 521273 | + |
| cl21342 | Ntox46 | WP_135286501.1 | hemagglutinin repeat-containing protein | EZ242_RS17560 | 4473 | GCF_004681965.1 | unplaced scaffold | NZ_SMLL01000007.1 | 122773 | 136194 | + |
| cl41756 | PoNe | WP_135286502.1 | hemagglutinin repeat-containing protein | EZ242_RS17565 | 996 | GCF_004681965.1 | unplaced scaffold | NZ_SMLL01000007.1 | 136466 | 139456 | + |
| cl41756 | PoNe | WP_135286504.1 | DUF1911 domain-containing protein | EZ242_RS17575 | 976 | GCF_004681965.1 | unplaced scaffold | NZ_SMLL01000007.1 | 140316 | 143246 | + |
| cl00083 | HNHc (WHH) | WP_205959717.1 | HNH endonuclease | EZ216_RS19800 | 228 | GCF_004681975.1 | unplaced scaffold | NZ_SMLK01000009.1 | 132117 | 132805 | - |
| cl39768 | CdiA-CT_Yk_RNaseA-like | WP_135307680.1 | DUF6531 domain-containing protein | DYL61_RS06475 | 1539 | GCF_004682045.1 | unplaced scaffold | NZ_QUZT01000008.1 | 31368 | 35987 | + |
| cl07564 | Cytotoxic | WP_135309673.1 | colicin E3/pyocin S6 family cytotoxin | DYL61_RS19470 | 377 | GCF_004682045.1 | unplaced scaffold | NZ_QUZT01000038.1 | 31781 | 32914 | + |