| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21444 | Tox-SHH | WP_005151087.1 | DUF6531 domain-containing protein | B0293_RS32050 | 1469 | GCF_001995215.1 | unplaced scaffold | NZ_MUXN01000024.1 | 393051 | 397460 | + |
| cl16862 | AHH | WP_198936704.1 | AHH domain-containing protein | BO219_RS14590 | 277 | GCF_001996285.1 | unplaced scaffold | NZ_MQAD01000045.1 | 1 | 836 | + |
| cl00173 | VIP2 | WP_077493381.1 | minor capsid protein | BKK47_RS02695 | 460 | GCF_001998825.1 | unplaced scaffold | NZ_MLHG01000015.1 | 16550 | 17932 | - |
| cl41214 | CdiA-CT_Ec-like | WP_077415504.1 | hypothetical protein | BKK50_RS03905 | 203 | GCF_001998965.1 | unplaced scaffold | NZ_MLHJ01000026.1 | 23851 | 24462 | - |
| cl26675 | COG5529 | WP_077415508.1 | filamentous hemagglutinin N-terminal domain-containing protein | BKK50_RS03915 | 1131 | GCF_001998965.1 | unplaced scaffold | NZ_MLHJ01000026.1 | 24793 | 28188 | - |
| cl21405 | Ntox15 | WP_077417928.1 | polymorphic toxin type 15 domain-containing protein | BKK50_RS10805 | 463 | GCF_001998965.1 | unplaced scaffold | NZ_MLHJ01000122.1 | 6754 | 8145 | - |
| cl26675 | COG5529 | WP_077487895.1 | polymorphic toxin-type HINT domain-containing protein | BV907_RS01655 | 1035 | GCF_001999765.1 | unplaced scaffold | NZ_KV908322.1 | 407534 | 410641 | + |
| cl41780 | CDI_toxin_Bp_tRNase-like | WP_077410923.1 | hypothetical protein | B0475_RS06360 | 4182 | GCF_002000055.1 | unplaced scaffold | NZ_MVBD01000003.1 | 358334 | 370882 | + |
| cl19110 | CDI_toxin_EC869_like | WP_208604185.1 | VENN motif pre-toxin domain-containing protein | BKK48_RS08010 | 513 | GCF_002000125.1 | unplaced scaffold | NZ_MLHH01000017.1 | 78314 | 79857 | - |
| cl00083 | HNHc (WHH) | WP_242650028.1 | HNH endonuclease | BKK51_RS13800 | 552 | GCF_002000425.1 | unplaced scaffold | NZ_MLHK01000023.1 | 3846 | 5504 | - |