| Superfamily ID | Domain name | NCBI ID | Description | Gene name | Product length | Assembly | Seq type | Genomic accession | Start | End | Strand |
| cl21614 | YkuD_like | WP_083808423.1 | L,D-transpeptidase family protein | ACIX9_RS09910 | 2430 | GCF_000178975.2 | chromosome | NC_015064.1 | 2314090 | 2321382 | - |
| cl21614 | YkuD_like | WP_044031959.1 | L,D-transpeptidase family protein | FBFL15_RS16435 | 286 | GCF_000253275.1 | chromosome | NC_016001.1 | 126372 | 127232 | + |
| cl21614 | YkuD_like | WP_167856469.1 | DUF6443 domain-containing protein | E5K02_RS17245 | 1816 | GCF_004745645.1 | unplaced scaffold | NZ_SRMB01000003.1 | 481984 | 487434 | + |
| cl21614 | YkuD_like | WP_173206468.1 | DUF4157 domain-containing protein | HNE05_RS10115 | 377 | GCF_013200955.2 | chromosome | NZ_CP053697.2 | 2181893 | 2183026 | + |
| cl21614 | YkuD_like | WP_189133981.1 | DUF4157 domain-containing protein | IEY86_RS24385 | 468 | GCF_014646055.1 | unplaced scaffold | NZ_BMMS01000023.1 | 45574 | 46980 | - |
| cl21614 | YkuD_like | WP_230969969.1 | DUF4157 domain-containing protein | J0W34_RS20060 | 413 | GCF_017309585.1 | chromosome | NZ_CP071321.1 | 4317772 | 4319013 | - |
| cl21614 | YkuD_like | WP_141287905.1 | DUF4157 domain-containing protein | LRH25_RS10610 | 693 | GCF_021043325.1 | unplaced scaffold | NZ_JAJNKD010000003.1 | 557718 | 559799 | - |
| cl21614 | YkuD_like | WP_240846650.1 | DUF4157 domain-containing protein | MKP07_RS08315 | 269 | GCF_022512515.1 | unplaced scaffold | NZ_JAKWBK010000001.1 | 1282145 | 1282954 | + |
| cl21614 | YkuD_like | WP_042212269.1 | DUF4157 domain-containing protein | BMX35_RS00570 | 353 | GCF_900109245.1 | unplaced scaffold | NZ_FNZI01000001.1 | 130669 | 131730 | + |
| cl21614 | YkuD_like | WP_218148540.1 | DUF4157 domain-containing protein | BM015_RS17830 | 369 | GCF_900115755.1 | unplaced scaffold | NZ_FOXQ01000013.1 | 100192 | 101301 | - |